| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0237 |
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| Symbol | dapB |
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| ID | 7387548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 207100 |
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| End bp | 207912 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643649937 |
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| Product | dihydrodipicolinate reductase |
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| Protein accession | YP_002548153 |
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| Protein GI | 222147196 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0289] Dihydrodipicolinate reductase |
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| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGG TCGTGGTTGG CGTCAGCGGA CGCATGGGGC AAGCTCTGGT GCGGATCATC
TGCGAGACGC AGGGTGCTGT GCTACATGCG GCGGTCGGTC GTCCGGGTTC CGCCTCGATT
GGCAGGGATG CCGGTGATCT GGCCGGCGTC GGTCCATTGG GTGTTCCCGT CACCGACGAT
GCACTGGCCG CCTTCGTCAA TGCCGATGGG GTGATCGACT TTACCAGACC GGAAACCTCG
GTGGAGTTTT CCGCATTGGC AGCCCAGGCC CGCATCGTTC ATATCATTGG CACAACGGGA
TGCTCGCCAG CCGATGAAGC AAGGTTCGAG GCGGCAGCGC GCCATGCCAG AATCGTCAAA
TCCGGCAATA TGAGCCTCGG CGTCAACCTG TTGTCGGTCC TGGTTGCCCA GGCGGCAAAG
GCGCTGGAAG CCTCCGGCTG GGATATCGAA GTGCTGGAAA TGCATCACAA GCACAAGGTC
GATGCGCCCT CAGGCACCGC CCTTCTTCTG GGGGAAGCAG CCGCCAAGGG GCGCGGTATC
GACCTCACGG AGAAAGCCGT CAAAGTGCGC GATGGCCATA CCGGCCCGCG TGAGCCCGGA
TCGATCGGCT TTGCAACGCT GCGCGGCGGC TCTGTCATCG GCGAACATTC CGTTCTGCTG
GCTGGCGAAG GTGAGATCGT CACGCTCTCC CATAGCGCTG GCGACCGTTC AATCTTTGCA
CGCGGCGCGG TCAAGGCCGC GCTCTGGGCG CAGGACAAGA AACCCGGCCT TTACTCCATG
CTCGATGTTC TCGGGCTTTC ATCTCCGCAC TAA
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| Protein sequence | MKLVVVGVSG RMGQALVRII CETQGAVLHA AVGRPGSASI GRDAGDLAGV GPLGVPVTDD
ALAAFVNADG VIDFTRPETS VEFSALAAQA RIVHIIGTTG CSPADEARFE AAARHARIVK
SGNMSLGVNL LSVLVAQAAK ALEASGWDIE VLEMHHKHKV DAPSGTALLL GEAAAKGRGI
DLTEKAVKVR DGHTGPREPG SIGFATLRGG SVIGEHSVLL AGEGEIVTLS HSAGDRSIFA
RGAVKAALWA QDKKPGLYSM LDVLGLSSPH
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