| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0169 |
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| Symbol | infB |
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| ID | 7388332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 157583 |
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| End bp | 160363 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643649888 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_002548106 |
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| Protein GI | 222147149 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACA GCAAAGACGA CAAGACACTC AGCGTTACGG GCAAGAAGAC ACTCACGCTC
AAGCCGACGG GAGTGAACCA GGGTACCGTG CGCCAAGATA TGGGTCGCGG TCGCACGAAG
GCCGTTGTGG TCGAGACGCG CAAGCGCCGC CCGACCCGTC CTGAAGACGA ACGCGCAGGC
CAGCCGCAGG GCCGCGTTGG CGACGATGCA CCGGCAACGG CAGCTGCTGC CCCCGTGCAG
ACGCCAGCCC CAGTGCAGGC TCCGGCGCCA GTCGCCGCCG CACCGCAGGC ACCGCGCCCA
GCGGCTCCTG CGCAGCGCGT TCAACAGACA AATCAATACT CGCAGCAGCG CCATCCAGGC
CAGCAGAACC GTCCGCAGGC GTCGAGCCAG CCGAGCCGCC AGCCTGACCG GCCGCGTGGC
GCGGTACTGC ACGATCTGTC CGCCAGCGAA ATGGATGCGC GCCGCCGCGC TCTGGCCGAG
GCCCAGGTCC GCGAAGTCGA GGACGCCAAG CGTCGCGCCG AGGAAGAGGT TCGCCGTCAG
GCTGAAGAGG TCGAGCGTCA GCGTCTTGCC GCTTTGGAAG CCATTCGCCA GGCCGAAGAG
GACAAGGCCC GAGCGCTTGA AGCCAAAAAC GCCCCTGAGC CTGTTGCAGA GCCCGTCGCT
CCGGTGGCAG AAACGCCACG CGCCGCCGAT CCAGCGCCCC GTGCGCCATC GCCTGCTGGT
GCAAAGCCGG CTGCCGGTGC ACCCGCTCCG AGCTTCGTGC GCGGTCGCAA GCCTGAAGGT
GAAGACGATG AAAATCGCGG CCCCGCCCGT GGTGGTCCGG TGCGCGGCAA GGTCGTGCGT
CCTGAGCCCG CCAAGGTTCC GGCGCGCCCC AAAACCGAGG ATGAGCGCCG CCGTGGCAAG
CTGACCGTCA CCACCGCCGC TGTCGATGAA GACGGCAATG CGCGTGGCCG TTCGCTGTCG
GCCATGCGCC GTCGCCAGGA GAAATTCCGC CGCAGCCAGA TGCAGGAACC GCGCGAAAAG
GTCATGCGCG AAGTGGTTCT GCCGGAAACC ATCACCATTC AGGAATTGTC GCAGCGCATG
TCCGAACGGG CCGTCGATGT GATCAAGTAC CTGATGAAGG AAGGTCAGAT GATGAAGCCG
GGCGACGTCA TCGACGCCGA TCTGGCCGAG TTGATCGCCA CCGAATTCGG CCATACCGTC
AAGCGCGTTT CCGAATCCGA CGTTGAAGAA GGCATTTTCG ACGTCAAGGA CGACGCAGGC
GAAATGGTGT CGCGTCCGCC GGTCGTCACC ATCATGGGTC ACGTCGACCA CGGCAAGACC
TCGTTGCTCG ACGCCATCCG CCAGACCAGC GTTGTTTCGG GTGAAGCCGG TGGCATTACC
CAGCATATCG GCGCCTATCA GGTGGAGCAG AACGGCCACA AGATCACCTT CATCGACACC
CCCGGCCACG CCGCCTTTAC GGCCATGCGT GCTCGTGGCG CTCAGGCGAC CGACATTGCC
ATTCTGGTGG TTGCCGCCGA TGACAGCGTC ATGCCGCAGA CGATCGAGTC GATCCACCAC
GCCAAAGCGG CCAATGTGCC GATCATCGTG GCGATCAACA AGATCGACAA GCATGAGGCC
AACCCGGAAA AAGTGCGCCA GCAATTGCTC CAGCACGAGG TGTTCGTCGA ATCCATGGGC
GGTGAAGTGC TCGACGTCGA AGTGTCGGCG AAGAACAAGC TCAATCTCGA CAAGCTGCTG
GAAGCTGTGC TTCTTCAGGC CGAAATTCTC GACCTGAAGG CCGATCCAAG CCGGACTGCC
GAAGGTCTGG TTATCGAAGC CCAGCTCGAC CGCGGTCGTG GCTCCGTTGC CACTGTTCTG
GTGCAGAAGG GTACGCTGCG TCCGGGGCAA ATCATTGTGG CTGGCGATCA GTGGGGCCGC
GTGCGCGCCC TCGTTAACGA CAAGGGCGGT CACGTCAAGG AAGCAGGACC TGCCATGCCG
GTCGAGGTTC TCGGCCTGTC GGGTACGCCT GCCGCCGGTG ACAAGTTCGC CGTGGTTGAA
AGCGAAGCCC GCGCCCGTGA AATCTCGGAA TACCGTCAGC GTCTGGCCCG CGACAAGGCC
GCTGCCCGCC AGTCCGGTCA GCGCGGTTCG CTCGAGCAGA TGATGAGCAA GCTGCAGGAT
ACCGGCTTCA AGGAATTCCC GCTGGTCATC AAGGCCGACG TTCAGGGTTC TGTCGAAGCG
ATCGTCGCAG CGCTCGACAA GCTGGGAACC GACGAAGTGC GGGCCAGGAT CGTCCATTCG
GGCGCCGGTG CCATCACGGA ATCGGATATT TCGCTTGCCG AAGCATCCAA CGCTGCGATC
ATCGGCTTCA ACGTTCGTGC CAATGTTCAG GCGCGGGCCG CGTCTGAGCG TACCGGCACC
GAAATCCGCT ACTACAACAT CATCTACGAT CTGGTGGATG ACGTGAAGGC AGCGATGTCG
GGTCTGCTGT CGCCGGAACG CCGCGAAACC TTCCTCGGAA ATGCCGAGAT CCTCGAAGTG
TTCAACATCA CGAAAACGGG CAAGGTTGCC GGTTGCCGTG TTGTCGAGGG CAAGGTCGAG
CGTGGCGCAG GTGTGCGTCT GGTGCGCGAC AACGTCGTCA TTCACGAAGG CAAGCTCAAG
ACGCTCAAGC GCTTCAAGGA CGAAGTGGCA GATGTGCCGA TGGGCCAGGA ATGTGGCATG
GCCTTCGAAA ACTACGAAGA CATCCGCGCT GGCGACACCA TCGAGTGCTT CCGCGTCGAG
CATATCACCC GTACGCTGTA A
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| Protein sequence | MTDSKDDKTL SVTGKKTLTL KPTGVNQGTV RQDMGRGRTK AVVVETRKRR PTRPEDERAG
QPQGRVGDDA PATAAAAPVQ TPAPVQAPAP VAAAPQAPRP AAPAQRVQQT NQYSQQRHPG
QQNRPQASSQ PSRQPDRPRG AVLHDLSASE MDARRRALAE AQVREVEDAK RRAEEEVRRQ
AEEVERQRLA ALEAIRQAEE DKARALEAKN APEPVAEPVA PVAETPRAAD PAPRAPSPAG
AKPAAGAPAP SFVRGRKPEG EDDENRGPAR GGPVRGKVVR PEPAKVPARP KTEDERRRGK
LTVTTAAVDE DGNARGRSLS AMRRRQEKFR RSQMQEPREK VMREVVLPET ITIQELSQRM
SERAVDVIKY LMKEGQMMKP GDVIDADLAE LIATEFGHTV KRVSESDVEE GIFDVKDDAG
EMVSRPPVVT IMGHVDHGKT SLLDAIRQTS VVSGEAGGIT QHIGAYQVEQ NGHKITFIDT
PGHAAFTAMR ARGAQATDIA ILVVAADDSV MPQTIESIHH AKAANVPIIV AINKIDKHEA
NPEKVRQQLL QHEVFVESMG GEVLDVEVSA KNKLNLDKLL EAVLLQAEIL DLKADPSRTA
EGLVIEAQLD RGRGSVATVL VQKGTLRPGQ IIVAGDQWGR VRALVNDKGG HVKEAGPAMP
VEVLGLSGTP AAGDKFAVVE SEARAREISE YRQRLARDKA AARQSGQRGS LEQMMSKLQD
TGFKEFPLVI KADVQGSVEA IVAALDKLGT DEVRARIVHS GAGAITESDI SLAEASNAAI
IGFNVRANVQ ARAASERTGT EIRYYNIIYD LVDDVKAAMS GLLSPERRET FLGNAEILEV
FNITKTGKVA GCRVVEGKVE RGAGVRLVRD NVVIHEGKLK TLKRFKDEVA DVPMGQECGM
AFENYEDIRA GDTIECFRVE HITRTL
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