Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0080 |
Symbol | iolB |
ID | 7388263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 80714 |
End bp | 81532 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643649819 |
Product | hypothetical protein |
Protein accession | YP_002548037 |
Protein GI | 222147080 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3718] Uncharacterized enzyme involved in inositol metabolism |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.76914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCAACC TATTGCGCAA GCCCGTGGGC ACCACCGGAA AAGTGCATGA CATCACCCCG GAATCGGCCA ATTGGGGCTA TGTCGGCTTT GGGCTTTACA AGCTGAAGGC GGGCGAGAAA GCTGCCGAGC AAACCGGCGA GACAGAAGTG ATTCTGGTGC TGGTCGAGGG CAAAGCCGAA ATTTCCGGTG CGGGCAAAAG CTTCGGCGAG CTTGGCGACC GCATGAATGT GTTTGAGAAA AAGCCGCCCC ATTGCGTTTA TATCCCCGCT GGCAGCGAGT GGAGCGCCAC CGCCACCACG GATGTGACAT TGGCCGTCTG TACCGCCCCC GCAAAGCCGG GCCGTGAAGC ACAAGTGATT GGCCCGGCAG GTGTAGCCCT CACGGAACGC GGCAAGGGTG CCAACACCCG CTATATCTTC CCCATCGCCA TGGAAGAGCG CGATGTGGCC GATAGCCTGC TGGTAACGGA AGTGTTCACC CCGCAGGGCA ACTGGTCATC CTATCCGCCG CATCGCCATG ATGAGGATAA TTTCCCTGTT ATGACCTATC TGGAAGAGAC CTATTATCAT CGTCTCAACC CGGCTCAAGG CTTTGGCTTC CAGCGCGTCT TTACCGAAGA CGGCACGCTT GATGAAACCA TGGCAGTCTC GGATGGCGAT GTGGTGTTGG TACCCAAGGG CCACCATCCT TGTGGAGCGC CTTATGGCTA TGAGATGTAT TATCTCAACG TCATGGCAGG TCCAATGCGT AAATGGCGCT TTCAGAACCA TCCGGATCAT GACTGGATTT TCAAACGCGA CAATCCGCCA AAAGCTTAA
|
Protein sequence | MTNLLRKPVG TTGKVHDITP ESANWGYVGF GLYKLKAGEK AAEQTGETEV ILVLVEGKAE ISGAGKSFGE LGDRMNVFEK KPPHCVYIPA GSEWSATATT DVTLAVCTAP AKPGREAQVI GPAGVALTER GKGANTRYIF PIAMEERDVA DSLLVTEVFT PQGNWSSYPP HRHDEDNFPV MTYLEETYYH RLNPAQGFGF QRVFTEDGTL DETMAVSDGD VVLVPKGHHP CGAPYGYEMY YLNVMAGPMR KWRFQNHPDH DWIFKRDNPP KA
|
| |