Gene Ava_C0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0162 
Symbol 
ID3678020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp191902 
End bp192285 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content49% 
IMG OID637715243 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_320437 
Protein GI75812820 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCTT ATACAAATCG ATGCATCCTG GTGATTGACG ACGAACCTGA CCTGTGCAGC 
ATTGTCAAGT TCACGCTAGA ACGCCTCAAA AGCTGGAAAA TCCTCACAGC TGAGTCTGCA
CAGGCAGGAC TGATGCAGGC AGAAACGCAG CAACCAGACG TGATTTTGCT CGATCTGAGC
CTGTGTGGTC AATATAGACT GACTATGCTG CAATCTTTGA AAACTAATCC GACTACGCAG
TCGATTCCGG TTATCTTGTT TACCGCCACA GACCCGTCAG ACGATTCGCT GGGATTTGAC
CCCTCTGAAT TTGCTGGAGT GATCCTGAAG CCGTTCAATG TCTTGCAGCT TGGCGAGCAG
ATTATTGAGC AACTGGGGTG GTGA
 
Protein sequence
MSSYTNRCIL VIDDEPDLCS IVKFTLERLK SWKILTAESA QAGLMQAETQ QPDVILLDLS 
LCGQYRLTML QSLKTNPTTQ SIPVILFTAT DPSDDSLGFD PSEFAGVILK PFNVLQLGEQ
IIEQLGW