Gene Ava_C0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0078 
Symbol 
ID3677817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp106973 
End bp107770 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content40% 
IMG OID637715162 
ProductDNA polymerase I-like 
Protein accessionYP_320356 
Protein GI75812739 
COG category[L] Replication, recombination and repair 
COG ID[COG0417] DNA polymerase elongation subunit (family B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATA ACCACAGAGA TTTTGTGAAG AAATCTAAAG GGATAATCTT TGTCGATGAA 
GATAAACTAA ACATTTATTG GAAAGACCCC TCTCCAATAA AACCTTGGCA GCCCAAAATA
CAACTCAAGC CGTATCAGGA ACTTTCACAA ATATTTGTTG ATATCGAAAC AGCAGGAATA
AACCCATTTG AAAGCCGTAT TTATGCTATT GGTTGTATGG ATTCAAGGGG ATATTCTACT
ATTTTCATGG ATATCTCAGA AGCTAAAATA CTGACCAAAT TTATCAACCA TCTCAGTAAA
AGAAATCCAG ATGTCATTTT CACCTATAAC GGGATGGCAT TTGATATTCC ATTTATTATT
ACGCGATGCA ACTTGCACGG TATAAAACAC CCATTTCAAG TTGCATCCAA ATCTCGGACT
ATTCGTACCG CCCAAGTACG GGGTGAGCCA CTAAAAATTC AGGAGGTATT CATCCGAAAT
AGCCAACACG TAGACATTTA TATCTGCGTT CTGAGGTGGG ATTTCATAGC CAAAAAGCTA
ACTAACGGCA GATCGCTCAA AAAGGCTGTA TTGGACATGG GACTGCGCCA GAACACCAGG
CTAGTTCTTC CCTATGAGGA AATCCTCGCT TGTTGGAAAG ATGGCCCCAA CAGTAAGGGA
TGGAAACGCC TAAAAGAGTA TCTTATTTAC GACCTCGAAG ACACCCGGCT AATTGCGAAT
AGACTTGTAC CCTCATACTA TTATGAAGCA CTAATTGTAC CGGAAATGAA TCTCCAGCAG
CTAAGAGATT ATTTATAA
 
Protein sequence
MSYNHRDFVK KSKGIIFVDE DKLNIYWKDP SPIKPWQPKI QLKPYQELSQ IFVDIETAGI 
NPFESRIYAI GCMDSRGYST IFMDISEAKI LTKFINHLSK RNPDVIFTYN GMAFDIPFII
TRCNLHGIKH PFQVASKSRT IRTAQVRGEP LKIQEVFIRN SQHVDIYICV LRWDFIAKKL
TNGRSLKKAV LDMGLRQNTR LVLPYEEILA CWKDGPNSKG WKRLKEYLIY DLEDTRLIAN
RLVPSYYYEA LIVPEMNLQQ LRDYL