Gene Ava_C0069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0069 
Symbol 
ID3677808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp97772 
End bp98629 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content42% 
IMG OID637715153 
ProductUBA/THIF-type NAD/FAD binding fold 
Protein accessionYP_320347 
Protein GI75812730 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.701248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.470884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAT TAACTACTTA CCAACAAGCT TTACCCGTCT TACCTCGCAA TCATACTCGT 
ATTAACTTCG TCTTAGTAGG AGTAGGAGGA ACAGGCGGGT TTCTTGCAGA AGATTTATGT
CGAATTATTC TGCAACTCCA GCACACTAGA AAAGAAATTA ACTTTGCGAT CGTCGATGGC
GATACTGTCG AACTCAAGAA TATCAGCCGC CAAAATTATC AACAAGCTGA AATTGGGCTA
CCAAAGGCAG AAACACTGGC TGCAAGATGC AGTGCCAAGT ATGGGATAGA GATTACAGCC
GTTTGCGACT GGTTTGAAGA AGACATGATT CGCACGGCCA GTTGGTGGAA TACCCTAACG
GTAATTATTG GCTGTGTAGA TAACAGCGCC GCCAGGAGCA AAATTCACTC TGTTCTCAAA
ATAAACAGTG CAAATGAGCC AGCATCTCTA TTTTGGCTGG ATTGTGGAAA CAGCAACTAC
TCTGGACAAG TAGTAATTGG AACGCACTCT AATTTTGATA TAGTCCAAGC TTCCAATAAC
CCAGACAAAC CTCAATTCTG GTTGCATCTT CCCTCCCCGG TGCTGGTTCA CCCAGAACTG
CTAGTTCCTC AGCCAGAAGA ACTTAGCGAC AACAACCTTT CATGTGCAGA AATTCAAGCA
CGGAATTATC AATCACTATT CGTCAATAAA ATGACGAGTG CGATCGCAGC CCAGTATTTA
CTAGAATTAA CCCTCACTGG GGGGTTGAAA AAGTTTGCCA GTTATTTTGA CCTCAAAGCA
ATGTCAACTA GAAGTTTATA TACAAGCATT GACCAACTCA AAAAATACTA TATTCTGCAA
ACAAATTACC ACAAATAG
 
Protein sequence
MLELTTYQQA LPVLPRNHTR INFVLVGVGG TGGFLAEDLC RIILQLQHTR KEINFAIVDG 
DTVELKNISR QNYQQAEIGL PKAETLAARC SAKYGIEITA VCDWFEEDMI RTASWWNTLT
VIIGCVDNSA ARSKIHSVLK INSANEPASL FWLDCGNSNY SGQVVIGTHS NFDIVQASNN
PDKPQFWLHL PSPVLVHPEL LVPQPEELSD NNLSCAEIQA RNYQSLFVNK MTSAIAAQYL
LELTLTGGLK KFASYFDLKA MSTRSLYTSI DQLKKYYILQ TNYHK