| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0044 |
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| Symbol | |
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| ID | 3678120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007412 |
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| Strand | + |
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| Start bp | 65758 |
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| End bp | 67584 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637715128 |
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| Product | hypothetical protein |
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| Protein accession | YP_320322 |
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| Protein GI | 75812705 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.612223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.249044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTTC ACTTCACCGC ATATTTCTTC AATTTCCTCA TGCAATTAAC ACAGATTAAT
ATGAATAATC ATCTGTTTGC AACTGCTAAA ACTAAGACAG TTAGAGAAGT AAAAGCAAAC
AATAAAAATA GCAATACTGA CTTTAGTAAA TATACAGATA AGCTCATGTC ACCTCAAGGT
TTGGCACTTG CTGGGGGAAT TGGCTTATTG TTGCTTCTAC AGCTTTTTAG TAATGGTAAA
AAAGGCAAGC TTGCTACTAG CTATTGGGGT GGAGCAAAGG AAACCGCTCA AGCTAAGAAA
AAAGCTCTCA AGCAAATCGT CGCTCCTAAA TGTGATAGTG CCAGTTTATA TATTGGAGTA
CATAGATACA AGGGTCAAAA ATCACCCCAG GGGAGTGGGG GAGTTCCAGT TTATGTACCC
GATGTCCAAC GCGGAACTGC TGTAATTGGC GCACCTGGTA GTGGTAAATC ATTCTCGGCT
ATCAACCCGA TGATTTACTC AGCAATTGAC CAAGATTTTG GTATCGTATT ATACGATTTT
AAGTATGCTA GTCAAGCCAA AATCGCCAGT TATGCCAAAT CCAAGGGGTA TGACGTACAT
ATCTTTGCAC CGGGATTTCC CGAATCAGAG GTATGTAACC CAATCGATTT CTTGCGTGAC
AGTAGCGATG CTGAAACCGC ACGGCAGTTA GCTACGGTAA TTAACAAAAA CTTCCGCCTG
TTAGGTAATG CGTCTGAGGA TGCCTTCTTT GGCCCCGCCG GCGACCAGTT GACCCAGGCT
ATTTTAATGC TAACCAAAGA GTTTGACGAT CGCGCTGATA TTATGACGGC AGCGGCAATA
CTTTCTAGCG AGAAGATGGT CGAACGCTTG ATGGCAGCCG AACTAAACCC CTGGATTAGG
ATAGCTTTTG GTCAATTATT TAGCTCGGCT GGCTCAGAGA AAACTGTAGC GGGTATCGCT
GGTAGTGCTT CATTGATGTT CACCCGGTTC ATGGCAAGGG GTACATTGGG ATGCTTTGTC
GGTAAAACAA CCTTGCCCTT GGAGGTAAAA CGCAAACAGA TGATTATCTT CGGGTTAGAC
CGCGAACGCC GCGATGCTGT CAGCCCTCTG ATGACCAGTA TTCTTCACAT GGTAGTTTCC
CGTAGTATTG CCAAAAAACG TAAGGAAGAC GGCCCATTAG TGGTGTGTCT TGACGAGTTG
CCAAGTATCT TCCTTCCAGA TTTATTTAGA TGGCTTAATG AATCTCGTTC CGAAGGATTC
TGCGGTATCC TGGGTTGGCA AAATATGGGT CAGCTTGAAA AGATTTATGG TAAAGAAATC
TCTAAAGCTA TCCTTGGTGC GTGCGGTACA AAATTTGTTT TTAATCCTGG TGAAGAAGAA
TCAGCACGAT TATTTTCTGC ATATTTAGGT GAAGAGGAAA TTAAATATAA ACAAAAATCC
CGCTCAACGG GAGGGGGTAA AGCCAGCACA TCTATCAGCG AACAAGAACG GACTCGCAAG
CTATTCGAGC CAGCCCAATT CCTTAAATTA CCACCTGGTA AATGTCTATT TATCAACCCA
GCTTATAGCA ATAAAAATGA GGGTTCAGTA CCACTATTAA AAAATATCAG AATCCCCAAA
TATATCATTG GATTAGAACA AGAAAATGAC GCTAACTGGG ATAAACTCAT CAAAGAGCTT
GCTAGGAAAA GTACCCAGAA AAAACCCACA CAGGAAGATT TAGATTTACG AGTCAAGGAA
GTAGATCGGA AGTTCCCTAT CCCACAAGCA CCCGTACAAG CGGGCAATGC ACCTTTACCT
GTTGATGCGT ACAAGAGCTT TTTCTAA
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| Protein sequence | MQLHFTAYFF NFLMQLTQIN MNNHLFATAK TKTVREVKAN NKNSNTDFSK YTDKLMSPQG
LALAGGIGLL LLLQLFSNGK KGKLATSYWG GAKETAQAKK KALKQIVAPK CDSASLYIGV
HRYKGQKSPQ GSGGVPVYVP DVQRGTAVIG APGSGKSFSA INPMIYSAID QDFGIVLYDF
KYASQAKIAS YAKSKGYDVH IFAPGFPESE VCNPIDFLRD SSDAETARQL ATVINKNFRL
LGNASEDAFF GPAGDQLTQA ILMLTKEFDD RADIMTAAAI LSSEKMVERL MAAELNPWIR
IAFGQLFSSA GSEKTVAGIA GSASLMFTRF MARGTLGCFV GKTTLPLEVK RKQMIIFGLD
RERRDAVSPL MTSILHMVVS RSIAKKRKED GPLVVCLDEL PSIFLPDLFR WLNESRSEGF
CGILGWQNMG QLEKIYGKEI SKAILGACGT KFVFNPGEEE SARLFSAYLG EEEIKYKQKS
RSTGGGKAST SISEQERTRK LFEPAQFLKL PPGKCLFINP AYSNKNEGSV PLLKNIRIPK
YIIGLEQEND ANWDKLIKEL ARKSTQKKPT QEDLDLRVKE VDRKFPIPQA PVQAGNAPLP
VDAYKSFF
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