| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0010 |
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| Symbol | |
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| ID | 3677775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007412 |
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| Strand | + |
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| Start bp | 27512 |
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| End bp | 30106 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637715094 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_320288 |
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| Protein GI | 75812671 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.144404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00213669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGTGGAGTA AAGCTTTGAA ACGTAGACAA CGTGCTTATT TGGGAATTAT AGGAACTATT
GTTTTATTGG GGACTCAGCC TGCAAACGCA CAAGCAAGCC CAAATGTCGC AGAGAATACA
GAAGTACCAA ACACACAGAT TCCTCAAACG AACATCAAAG GACTGTTAGC GCAGGAGCAA
CCACAAAATG CAGCAGTCAC AATTGTCACG GGAGTGCGCC TGAACTCAAC AGCTAACGGT
GTGGAAGTCA TTTTAGAAAC TCCCTCATCA GACAAGCTAC AAACCGCAAC TCAGAACGAG
GGGAATAACT TTATTGCAGA TATATCCAAC GCGCAACTGC GTCTGACAAC TGGTGACTCA
TTCCGCCAAG AAAAGCCAGT TGCGGGAGTT GCAGAAGTTA TAGTCACCAA TCAAGATGCT
AATAGTATTC GCGTTGTAGT GGTAGGTGAA ACCAGTCTTC CCAAAGTTGA GTTGTTTGAC
GACGATGCAG GTTTAGTTTT TGGTGTCACA CCAGATGCAA CATCTACACC ACCACCACAA
ACACCGGATA CTGAAAAACC TAGTAGTGAA ACACCACCAA CTCAACCATC GGCGCAAGAG
AAAGAACCGA TTGAATTAGT AGTGACAGGA GAACGTGATA GTTACAGTGT TCCTAGTGCG
ATAACTGCAA CCAAGATAGA AGCTCCACTC AGGGACATTC CCCAATCAAT TCAAGTAGTT
CCCCGTCAGG TAATTGAAGA TAGACAAATA GTTCGCATTG GTGAAACTAT CGAAAATGTC
AGTGGAGTTC AAGAACTACC AGGATACGGT GGTTCAACAT CCTTGACAGG TTATTACTTT
CGGGGTCTTT CATTGGCTTA TCAGAGTCTT CGCAATGGCT TCCGAGATAT TGGAGTTATT
GGTAGTCGTG ATATCGCTAA TATTGAGCGA GTGGAGTTTT TCAAAGGCCC CGCTTCTGTG
TTGTATGGAG GACGTTTTTC TTTAGGTGGA TTAACCAACA CAGTCACCAA AAAGCCGATA
GAAGAACCTT ATTACAATCT TGGTGCAACC ATTGGTAGTT ATGATTTTTA TCGTCCGACG
CTTGATATTA GCGGCCCATT AACCAGCGAT CGCTCTTTGT TATATCGTCT GAATTTAGCC
TATCAAAATT CCGGTAGTTT CCGCGATTTT AATGAAAATG AAAGTTTCTT TGTAGCCCCG
GCTATTACCT GGAAAATTAG TCCCAAAACC AGTCTAACAG TAGAGCTAGA ACAACAAAAC
TATAACTACA CTTTTGATTA TAACTTTCCG CCAGAGCGGG AAGTTTTTCA ACTACCAATT
AGTAGATTTT TAGGTGAGCC AAATTTTAAT GATGCTACCT TTAATTCCAC ATCAGTTAGT
TATAATTTTG AGCATAAATT TACTGATACT TGGAAGTTTC GCCAAGGATT TAGTGCCATC
ATTGTCAATG GTGATACCCG CCAAGTAGAA CTATTTGACC CTCTAGGCAA TGACCGCAGA
ACATTACCCC GTTCACCATT GAGAACCGAA GAAGAACAAG AAGATTACGT ACTCCAAAAT
GAAATATTTG GCGAATTTAA AACAGGTTCT ATTCAACACA AAATTCTTGT TGGTCTGGAA
CTATCGCGTT GGGGCTATGA TTTTAATTAC TTCCGAGGAA CGCTAGATCC AATCGATATT
TTTAACCCCC AATATGGCGC ACAAGCAATA AACTTTGAAC AAGAATTACA TCGCAAGCAA
AGCTCAGATA ACTTGGGGAT TTATCTACAA GACTTCATCG AGATTTCACA AAATTTGAAA
CTATTAGCTG GTGTTAGATT TGATATTAAT GATGTCTCTG TAGTCAACAA AATTACTAAT
ACAACTATTA ACCAGCAAAC AACTACTCGC TTTTCGCCAC GAGTGGGGAT AGTTTATCAA
CCAAGTTCCA CAACATCACT GTATTTCAAT TGGGCTAATT CCTTTAACCC ACAATTTTTT
AGAGTTAGTC GTACAGGTGA GCAGTTTCCA CCGACAACAG GGGAACAGTT TGAAGTAGGG
ATAAAACAGG ATTTCTTGAA CAATCGCCTC TCCACAACCT TAGCACTGTA TCAAATTACG
CAACAGAATG TGTTAACAAG TGATCCAGCA GACCCTAGAT TTAGTATCGC TACAGGCGAA
CAAAAAAGTC GTGGTGTGGA ATTAGATATA GCAGGAGAAA TACTACCAGG CTGGAAAATC
ATTGCTAACT ATGCCTATGC CAATGGTTTT GTCAGTAGAG ATAATAGCAT TCCTGAAGGC
GATCGCATTG CCGGGATTCC ACAACACAGT GCAAGTTTGT GGACTACCTA TGAATTACAA
AAAGGGAATT TACAAGGATT AGGATTTGGT TTAGGACTTG TATATGCGTC TGAAAGAGAA
GCCCAACTAC CAAATACCTT CACTCTTCCT TCATACGTGC GAGTCGATGC GGCTTTATCC
TACCGTCGGG ATAATCTCAA AGTTGGACTC AATTTCCGCA ATTTGTTTGA TACCAAGTAT
TACAACACCG ATACCTTCTA TATTTATCCC CAAGCACCTT TGACGGTATT GGGAACAGTA
TCAGTGCAGT TTTAA
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| Protein sequence | MWSKALKRRQ RAYLGIIGTI VLLGTQPANA QASPNVAENT EVPNTQIPQT NIKGLLAQEQ
PQNAAVTIVT GVRLNSTANG VEVILETPSS DKLQTATQNE GNNFIADISN AQLRLTTGDS
FRQEKPVAGV AEVIVTNQDA NSIRVVVVGE TSLPKVELFD DDAGLVFGVT PDATSTPPPQ
TPDTEKPSSE TPPTQPSAQE KEPIELVVTG ERDSYSVPSA ITATKIEAPL RDIPQSIQVV
PRQVIEDRQI VRIGETIENV SGVQELPGYG GSTSLTGYYF RGLSLAYQSL RNGFRDIGVI
GSRDIANIER VEFFKGPASV LYGGRFSLGG LTNTVTKKPI EEPYYNLGAT IGSYDFYRPT
LDISGPLTSD RSLLYRLNLA YQNSGSFRDF NENESFFVAP AITWKISPKT SLTVELEQQN
YNYTFDYNFP PEREVFQLPI SRFLGEPNFN DATFNSTSVS YNFEHKFTDT WKFRQGFSAI
IVNGDTRQVE LFDPLGNDRR TLPRSPLRTE EEQEDYVLQN EIFGEFKTGS IQHKILVGLE
LSRWGYDFNY FRGTLDPIDI FNPQYGAQAI NFEQELHRKQ SSDNLGIYLQ DFIEISQNLK
LLAGVRFDIN DVSVVNKITN TTINQQTTTR FSPRVGIVYQ PSSTTSLYFN WANSFNPQFF
RVSRTGEQFP PTTGEQFEVG IKQDFLNNRL STTLALYQIT QQNVLTSDPA DPRFSIATGE
QKSRGVELDI AGEILPGWKI IANYAYANGF VSRDNSIPEG DRIAGIPQHS ASLWTTYELQ
KGNLQGLGFG LGLVYASERE AQLPNTFTLP SYVRVDAALS YRRDNLKVGL NFRNLFDTKY
YNTDTFYIYP QAPLTVLGTV SVQF
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