Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0003 |
Symbol | |
ID | 3677795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | - |
Start bp | 10345 |
End bp | 11169 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637715087 |
Product | phytanoyl-CoA dioxygenase |
Protein accession | YP_320281 |
Protein GI | 75812664 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0103837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTGA CACAAGCGCA GTTAAAGGAA TATCAAGAGA AGGGTTTTAT CTTATTACCC GATTATTTTT CTGCTTTAGA AGTGGAAAGA ATGAAAACTG AACAGGCTCA TCTCTTGGCA GGAAATGCTG ATTACACAGT TTTAGAGAAT GATAAAACAA CTATTCGCTC TATTCACGGT TCTCATACTA ATAGTCATGT TTTTCAGAAT CTCTCACAAA TTTCTCGTTT GGTTGAGCCT GCAATGCAAA TTTTAAATAG TCAGGTTTAT GTTTATCAAT TCAAAATTAA TATTAAGGCG GCGTTTAGTG GTGATGTTTG GCAATGGCAT CAAGATTATA TTTTTTGGCG AAAAGAAGAT GGAATGCCAA CTAATAGAGT GACGAATGTT GTGATTTTTC TGGATGATAT GAATGAATTT AACGGGCCGC TATTTTTTAT TCCTGGTTCA CATCAAGAGG GAATGATTGA TATTGTTACC CAAAATGTTA TAGATAGTAA AGAGCAGAAT AATCCCCAAT GGTCTGCAAA TTTTTCTAAT AACTTAACTT ATTCTTTGAA TCGTCATACT GTTGCTAATT TAGTTAATAA ATATGGAATT TCGGCTATCA AAGCATTAGC TGGTTCGGCG TTATTTTTTG ATAGTAATAT TGTTCATGCT TCACCTAGTA ATATATCTCC TTTTTCTCGG AGTGTGGTAA TTATTACTTA TAACAGTGTT GAAAATATCC CTGTCAGCAT TCCGAATAAA AGACCAGAGT TTATTGTTAG TCGAGATTAT CAATCGATTA CTCCTGTATC AGATAGTTTT TTAATTACAA AATAA
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Protein sequence | MILTQAQLKE YQEKGFILLP DYFSALEVER MKTEQAHLLA GNADYTVLEN DKTTIRSIHG SHTNSHVFQN LSQISRLVEP AMQILNSQVY VYQFKINIKA AFSGDVWQWH QDYIFWRKED GMPTNRVTNV VIFLDDMNEF NGPLFFIPGS HQEGMIDIVT QNVIDSKEQN NPQWSANFSN NLTYSLNRHT VANLVNKYGI SAIKALAGSA LFFDSNIVHA SPSNISPFSR SVVIITYNSV ENIPVSIPNK RPEFIVSRDY QSITPVSDSF LITK
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