| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_B0178 |
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| Symbol | |
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| ID | 3677906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007410 |
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| Strand | - |
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| Start bp | 200286 |
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| End bp | 201965 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637714885 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_320079 |
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| Protein GI | 75812460 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.942874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATA CCCAAATCGA AAAACCCAAA ATAACAGAAA CACAGCACCA TCCCCCCACC
ACCTGGAAAA CCTACTTCAC CTTCAGCACC GACCACAAAG TCATCGGTAT CCAATATATC
GTCACCTCCT TTCTCTTCTT CCTCATCGGC GGTATCTTCG CCATGATTAT TCGCGGCGAA
CTAATCACCC CAGAAGCCGA TTTAGTTGAC CGCACAGTAT ACAATGCCAT GTTCACCATG
CATGGCACAA TCATGCTGTT CTTGTGGACT TTTCCTGTCT TAGTTGGTCT AGCAAACTAC
CTTGTCCCGC TAATGATTGG AGCGCGAGAC ATGGCATTTC CCCGCCTGAA TGCCGTCGCC
TTCTGGATGG TGCCAGTATT TGGAATTATC CTCATGGCTA GTTTCTTCCT ACCCGGTGGC
CCAGCCCAAG CCGGTTGGTG GTCTTATCCC CCAGTGAGTC TGCAAAATCC TACAGGTAAT
CTCATTAACG GTCAATTTCT CTGGCTGATA GCTGTAGCCA TATCGGGTGT ATCCTCAATT
ATGGGTGGTG TTAATTTTGT GACAACAATT GTCAAAATGC GCGCCCCAGG AATGACCTTC
TTTCGGATGC CGGCTTATGT TTGGGCAGTG TTCAGCGCCC AGATTATCCA ATTGTTTGGA
TTACCTGCAT TGACGGCAGG CGCAGTTATG TTGTTACTTG ACCTCAGCAT TGGTACAGCG
TTTTTTGACC CTGCCAAGGG CGGTAATGCA GTTCTCTTTC AACACTTCTT TTGGTTCTAT
TCACATCCAG CAGTCTACGT AATTATACTA CCTATTTTTG GCATTTTTTC CGAAATATTC
CCAGTTTATA GCCGTAAACC TCTGTTTGGC TATAAAGTAG TCGCCGTTTC CTCTCTATTA
ATTGCTGGTG TGAGTGGTTT TGTCTGGGTA CATCATATGT TTGCCAGTGG TACACCAGCC
TGGATGCGGA TAGTGTTCAT GATTTCCACA ATGTTTGTTT CCGTCCCCAC CGGGATCAAA
GTGTTTGCTT GGGTGGCAAC AATTTGGGGA GGTAAACTGC GTCTCGATAC CCCGATGCTG
TTTGCTTTGG GTGGATTGAT TATGTTTGTG TTTGCTGGTA TCACAGGCAT TATGCTTTCC
GCAGTACCAA TTGATATTCA TGTTAATAAT ACTTATTTCG TAGTTGGTCA CTTTCATTAC
GTCCTCTACG GGACTGTGAC AATGGGGATG TTTGCCGCCT TTTATCACTG GTTCCCCAAG
ATGACTGGGC GGATGTATTA CGAAGGCTTG GGTAAGCTGC ATTTTTGGTT ATCATTCATC
GGGACTAACC TCAACTTTTT ACCGATGCAC CCATTAGGCT TACAAGGGAT GTTGCGGCGG
GTTTCTTCCT ACGACCCAGA ATATGCTTTT TGGAATGTGA TTGCTAGTAT TGGTGGCTTT
TTGTTGGGGA TGTCTACATT ACCCTTTATT TTGAACATGA TTGGTTCTTG GGTACAGGGT
GAGAAAGCAC CGGATAATCC TTGGCGGGCT ATTGGGTTGG AGTGGCTGGT GGCTTCTCCG
CCGCCGGTGG AGAATTTTGA GGAGATTCCT GTGGTGATTT CGGAACCTTA CGGGTATGGG
AAGTCTGAAC CGTTGACGGC GAATCTGGAA AAGCAAGAGT TAGCAAGAGA TTTGAATTAA
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| Protein sequence | MTNTQIEKPK ITETQHHPPT TWKTYFTFST DHKVIGIQYI VTSFLFFLIG GIFAMIIRGE
LITPEADLVD RTVYNAMFTM HGTIMLFLWT FPVLVGLANY LVPLMIGARD MAFPRLNAVA
FWMVPVFGII LMASFFLPGG PAQAGWWSYP PVSLQNPTGN LINGQFLWLI AVAISGVSSI
MGGVNFVTTI VKMRAPGMTF FRMPAYVWAV FSAQIIQLFG LPALTAGAVM LLLDLSIGTA
FFDPAKGGNA VLFQHFFWFY SHPAVYVIIL PIFGIFSEIF PVYSRKPLFG YKVVAVSSLL
IAGVSGFVWV HHMFASGTPA WMRIVFMIST MFVSVPTGIK VFAWVATIWG GKLRLDTPML
FALGGLIMFV FAGITGIMLS AVPIDIHVNN TYFVVGHFHY VLYGTVTMGM FAAFYHWFPK
MTGRMYYEGL GKLHFWLSFI GTNLNFLPMH PLGLQGMLRR VSSYDPEYAF WNVIASIGGF
LLGMSTLPFI LNMIGSWVQG EKAPDNPWRA IGLEWLVASP PPVENFEEIP VVISEPYGYG
KSEPLTANLE KQELARDLN
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