| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_B0023 |
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| Symbol | |
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| ID | 3677737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007410 |
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| Strand | + |
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| Start bp | 35478 |
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| End bp | 37244 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637714732 |
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| Product | transfer complex protein TrsK-like |
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| Protein accession | YP_319926 |
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| Protein GI | 75812307 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAT CCTTGAAAAC AAATAGTGCT AAAAATCAAC AATTTAGTTT TGAGCAATTG
CAAAATCCTG ATAATGCAAT TGGCAAGTAC ACTCATCAAT TACTCACCCT TAATGGTCTA
ACAGTTTTAT CCTTGCTCGG TGCTTATATT CTCATAAGGG TATTTTTTAG CGACTCTAAT
AAAAAGAAAA TCGCTACTTC TTATTGGGGT GGGGGTAAGG AAACGACAGT GGCTAAGAAA
AAGGCTATCA AACAAATCGC CAATCCTCAA TGTGATAGTG CAGCGCTTTA CATTGGTAAG
CATCAGGACA AAGGTGATGG CAATACTTTC TATATTCCTG ATGTACAACG AGGTACAGCC
GTAATCGGCG CTCCGGGTAG TGGTAAAACA TTCTCTGCCA TCAACCCCAT GATTTACTCC
GCTATAGATC AGGGGTTTCC GATTATTGCT TATGATTTTA AGTATCCATC TCAAGCCAAA
GTTGCTGCCT ATGCTAAATA CAAGGGCTAT GATGTGCATA TCTTCGCCCC AGGATTTCCT
GAATCTGAAG TCTGCAATCC ACTAGACTTT CTGCGCGACA GTAGTGATGC GGAAACTGCC
CGACAAATTT CCACTGTCAT CAATAAGAAC TTTCGACTTC TGGGTAATTC AAGTGAAGAT
GGGTTCTTTG GGCCATCTGG TGATCAGTTG ACTCAAGCAA TCATCATGTT AGCTAAAGAG
TTTGGTGATT ACGCCGATGT CATGACCTGT GCAGCGATAC TCTCTAGTGA ACACATGGTC
AAACGCCTGA TGGCTGCTTC CTTAAACCCT TGGGTGAAAA TTGCCTTTGG TCAGTTGTTC
AGTTCTGCCG CATCTGAGAA AACCGTTGCC GGGATTGTGG CGACCGCTTC GATTATGTTT
ACTCGCTTTA TGGCGAAAAA TACTCTTGGC TGTTTCATCG GTAAAACGAC TCTGCCTTTA
GAAATCAAGG GTAAGCAGAT GATTATCTTT GGCTTGGACA GAGAACGGCG AGATGCTGTA
GGGCCTCTGA TGACCAGCAT TTTACACATG ACTATCGCCC GTAATATCGC TTCTAAACGC
AAAGATCCAT TAATCGTTGC CCTGGACGAA TTACCCTCGA TTTACTTGCC TGATCTATAT
AGGTGGCTCA ACGAATCCCG TTCTGAGGGG TTCTGCGGCA TTATCGGCTT CCAAAATATG
GGACAGTTAG AGAAGAATTA CGGTAAAGAA GTAGCTAAGG CTATCCTTGG CGCTTGCAGT
TCTAAATTCA TTTTTAATCC TGGTGAAAAT GAATCAGCGC AATTATTCTC TAGCTTTTTA
GGTGATGAGG AAATTAAGTA TAAACAGAAA AGCCGTTCTA GTGGTAGTAA AAATAATAGC
ACCAGCATTA GTGAGCAAGA AAAAACTAGA AAGCTGTTTG AATCGGCTCA ATTCCTGAAA
CTAATTGCAG GTAAATGTGT TTTTATTAAT CCTGCCTACG CCAACAATAA TGAGGGATCT
GTTCCACTAC TAAAGACGAT TAAAATCTCT CAACCTCTCA AAAATGTTGA TAAATATAAT
CAACTTAAAT GGGCAAGAAT TGTTAGTTTA GCCGCCAGGA AGAGTACCCA GAAATTTCCC
TCCCAGCAAG ATTTAGCTTT ACGGGTGAAT CTTGTTGAAC AGCATTTTCC CCTTCCCGAT
AATCCAGGGG CTGTTTCTAA TACTGGACTG ACAGCTAAAG AAGTCGGCAA CATAATTAAT
CAAGGAAGTT CTCAAAATGG AATTTAA
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| Protein sequence | MSQSLKTNSA KNQQFSFEQL QNPDNAIGKY THQLLTLNGL TVLSLLGAYI LIRVFFSDSN
KKKIATSYWG GGKETTVAKK KAIKQIANPQ CDSAALYIGK HQDKGDGNTF YIPDVQRGTA
VIGAPGSGKT FSAINPMIYS AIDQGFPIIA YDFKYPSQAK VAAYAKYKGY DVHIFAPGFP
ESEVCNPLDF LRDSSDAETA RQISTVINKN FRLLGNSSED GFFGPSGDQL TQAIIMLAKE
FGDYADVMTC AAILSSEHMV KRLMAASLNP WVKIAFGQLF SSAASEKTVA GIVATASIMF
TRFMAKNTLG CFIGKTTLPL EIKGKQMIIF GLDRERRDAV GPLMTSILHM TIARNIASKR
KDPLIVALDE LPSIYLPDLY RWLNESRSEG FCGIIGFQNM GQLEKNYGKE VAKAILGACS
SKFIFNPGEN ESAQLFSSFL GDEEIKYKQK SRSSGSKNNS TSISEQEKTR KLFESAQFLK
LIAGKCVFIN PAYANNNEGS VPLLKTIKIS QPLKNVDKYN QLKWARIVSL AARKSTQKFP
SQQDLALRVN LVEQHFPLPD NPGAVSNTGL TAKEVGNIIN QGSSQNGI
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