Gene Ava_A0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_A0021 
Symbol 
ID3677964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007411 
Strand
Start bp21920 
End bp22882 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content47% 
IMG OID637715073 
ProductParB family protein 
Protein accessionYP_320267 
Protein GI75812649 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.385204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAGCA AACGCAACGA ACCCTACGCC GCCATTAAAA AACCCGTCGA ACTGCTGTTT 
GGCAGCAGTA CCACTGCTAC GCAGCCTGAC AGTACACTCA ACGCTACCAG CACTGTTGCC
ATTGATAAAA TCCATCTGCC GACTTCACAA CCCCGCCGCT ACTTTGACGA ACATAAACTG
GAAGAACTAT CCCGCTCAAT CAAAGAACTA GGTATTCTCG AACCTCTGTT AGTGCGTCCG
CTTCCTGGAG GCGATTATGA ATTGGTAGCC GGGGAACGAC GCTACAGAGC GGCAACAATG
GCAGGATTAA CCGAAGTCCC GATTGTTGCG AAGGCAATGG ACGACACAAT TACATATCAA
GTGCGCCTCG TTGAAAATCT CCAACGCGAA GACCTTAACA CCCTAGAAGA AACCGAAGGT
ATCCTTGAAC TGTTGGCGTT GCGGTTGGCA ATCAGCGTTG ACGAAACTGT CAAACTACTG
CAAAAAATGG AAAACGAAGC TAAAGGAAAA ATTACCCGTA ACGTTACGGG TAACTCTCAA
ACGCTGCTGA TTGAGGAAGT ATTTACGGCA TTAGGAAGCA TGAGGTGGGA TTCGTTCGTT
CGCAACCGCC TACCTTTACT TAATCTTCCT CCTGATGTTC TAGAAGTAGT GCGTTCAGGG
AGGCTTGAGT ACACCAAGGC ACGAGCGATC GCACGGGTTA AAGATCAGGA AATCAGAATT
GAACTTGTGG AGACAGCCAT TGACTATAAC CTGTCACTAA GCGAAATTAA ACAGAAAGTC
AAAGAAATTG AGCAACAGTC TGAATCACAG TCATCCTCGC CAACTGAGTC AACATCCCTA
AAAGAGCGTG TAGATGATAC TTGGCGACGT TTCAAAAAAG CTAAAGTGTG GGACGACCCC
AAGAAAAAAG CGCGAATAGA GAAAGTACTG GCTCAGTTGG AAGCCTTGAT GAAAGAGGAT
TAA
 
Protein sequence
MSSKRNEPYA AIKKPVELLF GSSTTATQPD STLNATSTVA IDKIHLPTSQ PRRYFDEHKL 
EELSRSIKEL GILEPLLVRP LPGGDYELVA GERRYRAATM AGLTEVPIVA KAMDDTITYQ
VRLVENLQRE DLNTLEETEG ILELLALRLA ISVDETVKLL QKMENEAKGK ITRNVTGNSQ
TLLIEEVFTA LGSMRWDSFV RNRLPLLNLP PDVLEVVRSG RLEYTKARAI ARVKDQEIRI
ELVETAIDYN LSLSEIKQKV KEIEQQSESQ SSSPTESTSL KERVDDTWRR FKKAKVWDDP
KKKARIEKVL AQLEALMKED