| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_A0007 |
|---|
| Symbol | |
|---|
| ID | 3677978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007411 |
|---|
| Strand | - |
|---|
| Start bp | 7414 |
|---|
| End bp | 8856 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637715060 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_320254 |
|---|
| Protein GI | 75812636 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAA TATATCGCAA AATCAAACGT TCAATCAAAT TAGATAGAGT AGCTATTTTA
GTTGCTTTAG TTATTTCACC TATCATATTG GTGATAATTT TAGCACTAAA TATTTTTAAT
AAAAAAGAAA TAACAGCAAG TAATAAGTGT CATAGGGAGT TAACGATTGA TTTAGTGTCA
GGTAATTTCA CTACCGTTAA AAATACTGTC AATAAAAATC AACTAATTTG TTATTATTTT
AATGTCTTAA ACAACGATAA AATCGTGTTA TTTAGCAAGA ATAAAGTTAT TTTTAGAACC
CCCGACAATC ATCAGAATAT TGTACAAGGC TCATCAAATT TAAATTTGTC TAGTGCAGGT
ATCTACTCTA TTGTTATTAC TACAGAGCAA GAAACTGAAG ATTACCTGTT TACGCTAAAA
TTAGAGAATA ATCAAATACT AAAAAAAACT CAGTTAAAAA TAGTTGATAA ATTCTCGTAT
AAACAAGAAA ATACGAATCA AGAATCTACG AATGAGGCGT TACAACCGAC TTATAATGTG
GTTACACCTC CGTCTTTTAA ACCCAATTCA AAATTGCAAA GCATAGTTAA TGATGTTGTA
TCTCTGGTGG CATCAAAAGG TTTGCCAATC GATAGATTAT CTGTCAGTTT GATTAATTTA
AAAAATTCTG ACTGCTGTGC CTATGCTCAA TATTTAGATC AGGAACTTAG ATTTCCCGCC
AGTGTGGCTA AATTATTTTG GATGGTGTAT TTGTATGGTC AATATGAAAC TAAAAGGCTT
CCAGAGGGGG CAGTTCCTTA CAAAAATCTG GCGAAGATGA TTCAAGACTC TGATAATGAG
TCTGCTAGTT TGATTGTAGA TACAATTAGC CAAACGAAAT CTGGTGAAAG TTTACCTCCA
GATGAAATTG AACAATGGGT GCAAAAGCGG TTAGCAATGA ATTCATTTTT TGAAAAAGCT
AATTACCAGC AAATTAATAT TAGCCAAAAA CTTTTCCCTA CTGATTATCA AAAAAATGAT
GCCCCTGCTG GTAGAGATTT ACAAATACGT GGCAGCAATG AATCAAACCC TTTCAGAAAT
TACACAACTA CTTACAATGT AGCTCGGTTG CTTTTAGAAA TTGATCAAGG AAAGGCTATT
TCAGAAAAAT ATAGTAGCAG CATGAAGTTG CTTTTAAAAA GAAGTTTACG TCGTAGGGTT
TGGAAAAAAC AGGAGTTTAA TGCTATTGAA GGTTTTTTAG GTGAATCTTT GCCTGAAAAT
GCTTACTTTG CCTCAAAAAT GGGCTGGAAT TTTAATACTC GCAATGATGC TGCTGTTATT
GGCAGTCCAG ATGGCAAACA TAAATACATA TTAGTAATTT TTGGAGATGA TCCTAGCTTT
TATAAAGATA AAAAACTTTT TCCAGAATTG TCACGTTTAG TTTATGAACG TATGACAAAT
TAA
|
|---|
| Protein sequence | MPKIYRKIKR SIKLDRVAIL VALVISPIIL VIILALNIFN KKEITASNKC HRELTIDLVS
GNFTTVKNTV NKNQLICYYF NVLNNDKIVL FSKNKVIFRT PDNHQNIVQG SSNLNLSSAG
IYSIVITTEQ ETEDYLFTLK LENNQILKKT QLKIVDKFSY KQENTNQEST NEALQPTYNV
VTPPSFKPNS KLQSIVNDVV SLVASKGLPI DRLSVSLINL KNSDCCAYAQ YLDQELRFPA
SVAKLFWMVY LYGQYETKRL PEGAVPYKNL AKMIQDSDNE SASLIVDTIS QTKSGESLPP
DEIEQWVQKR LAMNSFFEKA NYQQINISQK LFPTDYQKND APAGRDLQIR GSNESNPFRN
YTTTYNVARL LLEIDQGKAI SEKYSSSMKL LLKRSLRRRV WKKQEFNAIE GFLGESLPEN
AYFASKMGWN FNTRNDAAVI GSPDGKHKYI LVIFGDDPSF YKDKKLFPEL SRLVYERMTN
|
|---|
| |