Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_5015 |
Symbol | |
ID | 3679028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 6302893 |
End bp | 6304143 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637720375 |
Product | hypothetical protein |
Protein accession | YP_325507 |
Protein GI | 75911211 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000194668 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.287563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAAAG ATGCACAAGG GCTAGTAGTA ACCACAGATT CAGCCAAAGC GATCGCAGCC ATTAACCGTT TTACCCAGCA GATGTTGGGT TATGGTAGTG ATGCAGAGAC AGCAATTTTA CAAGCAATTG CAGCAGATCC CACTTGTGCA TTAGCTCATG CTTATGCTGC TGCTTATTAT CTCACCCAAG AAAACCGTAA ATCTTGGCAG CAAGCTCAAC CATATCTGCG AACAGCACAA CAGCATTTCG CCAAAGCTAC TGCCAGAGAA CAATTATATA TACAAGCAAT TTCCGCCTGG GCAAATCAAG AGATTGAGGT AGCAATTGCT ATTCATGAAG AAATCACCGA TAAATCCCCC TGTGATTTGA TTTCTGTGCA GCAGGGACAA TATCACTATT TTTATTTGGG TGACAAAGAA AAATTATGGC AAATTGCCCA AAAGGTTTTA CCTAGCAATC CGGAAAATCA TTATTTATAT GGCATGGCGG CCTTTGGTTT AGAACAGTGT CACCAACTTG AAGCAGCAGA AAACATGGCT TATCAAGCGA TCGCCATAAA TAGGTATGAT CCTTGGGCGC ATCATGCGAT CGCTCATGTT ATGGAAACAC AGAAAAGAGT TGATGAGGGA ATAGCTTGGA TGGAGAGTTT TGCAGATACC TGGGAGAACT GCAACTCTAT GCTCTACACT CATAACTGGT GGCACATTGC CCTATATTAT TTGCAGTTAG AAAACTATCG AGAAGTTCTT AACCTGTATG ATACGCACAT TTGGAGACGT GCTAATAAAC AATCCCCCAA AGACCAAGTA GGAGCAATTT CCTTATTATT GCGGCTGGAA TTACACGGTG TAGATGTGGG CAACCGTTGG CAAGGTATCA GTCCTTATCT TTACAGTCGC ATTGATGAAC ACGCTTTACC ATTTCAAGAC TTGCATTATG TCTATGCACT CGCCAAAGCG GGACACCATG ATTGGGTAAA GCAAATGCTT TTGAGTATGC AGTATCACGC CTTGAGTATT AATCCTTTCC AACGACGGCG TTGGTTAGAA ATAACCCTAC CCGCCGCCAG GGGTATGGTA GCTCATGCCC AAGGAGATTT TCATACAACC GTTGCAGAAC TCCAGCCTGT TTTGTCGCGT CTGCATGAAA TTGGCGGGAG TCATGCACAG CGAGTATTAT TTGGGCAAGT TTATCAAGAT GCTGTGTCGT CGTCTCAACA GCAGAGTTGG GTTTATGGTA TTACCGCCTG A
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Protein sequence | MLKDAQGLVV TTDSAKAIAA INRFTQQMLG YGSDAETAIL QAIAADPTCA LAHAYAAAYY LTQENRKSWQ QAQPYLRTAQ QHFAKATARE QLYIQAISAW ANQEIEVAIA IHEEITDKSP CDLISVQQGQ YHYFYLGDKE KLWQIAQKVL PSNPENHYLY GMAAFGLEQC HQLEAAENMA YQAIAINRYD PWAHHAIAHV METQKRVDEG IAWMESFADT WENCNSMLYT HNWWHIALYY LQLENYREVL NLYDTHIWRR ANKQSPKDQV GAISLLLRLE LHGVDVGNRW QGISPYLYSR IDEHALPFQD LHYVYALAKA GHHDWVKQML LSMQYHALSI NPFQRRRWLE ITLPAARGMV AHAQGDFHTT VAELQPVLSR LHEIGGSHAQ RVLFGQVYQD AVSSSQQQSW VYGITA
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