Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4652 |
Symbol | |
ID | 3679867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5815298 |
End bp | 5815840 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637720008 |
Product | hypothetical protein |
Protein accession | YP_325144 |
Protein GI | 75910848 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.741195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAAA AAATTTTAGT TGCATTGGAT CGCTCCGACA TAGGGCAGCA AGTTTTTGAA CAAGCGCTGG TTTTAGCAAA AGCAACACAA GCCAAATTAT TATTGCTGCA CGTCCTATCT CCGGAAGAAG AAGGCAGTCC GCATATACCG ATGGTGTCTG GTTATGACTA CTATCCTGGT TTAAACGGTC AAAGTTTTGA GTTATACCAA AAACAATGGG ACACCTTTAA AAATGAGGGT GTACGGATGT TGCAAACTCT GTGTGCCAAA GCAAATACCC AAGGAGTTTC CACTGAATTT TCCCAAACCC TGGGCAACCC TGGCCGCACC ATCTGTAAAT TAGCTACTAA TTGGAATGCT GATTTAATTG TGATGGGACA TCGGGGCTTA TCCGGTGTCA AAGAATTATT CCTTGGTAGT GTCAGTAATT ACGTCCTGCA CCATACCCCT TGTTCAGTGC ATATAGTACA TGATTTAGGC AGAGTTAAAG ATACAGAACC AGTGCAGGAT CCAACTCAAG AACCGCAGCC ATTGCCTGCA TAG
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Protein sequence | MLKKILVALD RSDIGQQVFE QALVLAKATQ AKLLLLHVLS PEEEGSPHIP MVSGYDYYPG LNGQSFELYQ KQWDTFKNEG VRMLQTLCAK ANTQGVSTEF SQTLGNPGRT ICKLATNWNA DLIVMGHRGL SGVKELFLGS VSNYVLHHTP CSVHIVHDLG RVKDTEPVQD PTQEPQPLPA
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