Gene Ava_4652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4652 
Symbol 
ID3679867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5815298 
End bp5815840 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content43% 
IMG OID637720008 
Producthypothetical protein 
Protein accessionYP_325144 
Protein GI75910848 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.741195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAA AAATTTTAGT TGCATTGGAT CGCTCCGACA TAGGGCAGCA AGTTTTTGAA 
CAAGCGCTGG TTTTAGCAAA AGCAACACAA GCCAAATTAT TATTGCTGCA CGTCCTATCT
CCGGAAGAAG AAGGCAGTCC GCATATACCG ATGGTGTCTG GTTATGACTA CTATCCTGGT
TTAAACGGTC AAAGTTTTGA GTTATACCAA AAACAATGGG ACACCTTTAA AAATGAGGGT
GTACGGATGT TGCAAACTCT GTGTGCCAAA GCAAATACCC AAGGAGTTTC CACTGAATTT
TCCCAAACCC TGGGCAACCC TGGCCGCACC ATCTGTAAAT TAGCTACTAA TTGGAATGCT
GATTTAATTG TGATGGGACA TCGGGGCTTA TCCGGTGTCA AAGAATTATT CCTTGGTAGT
GTCAGTAATT ACGTCCTGCA CCATACCCCT TGTTCAGTGC ATATAGTACA TGATTTAGGC
AGAGTTAAAG ATACAGAACC AGTGCAGGAT CCAACTCAAG AACCGCAGCC ATTGCCTGCA
TAG
 
Protein sequence
MLKKILVALD RSDIGQQVFE QALVLAKATQ AKLLLLHVLS PEEEGSPHIP MVSGYDYYPG 
LNGQSFELYQ KQWDTFKNEG VRMLQTLCAK ANTQGVSTEF SQTLGNPGRT ICKLATNWNA
DLIVMGHRGL SGVKELFLGS VSNYVLHHTP CSVHIVHDLG RVKDTEPVQD PTQEPQPLPA