Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4479 |
Symbol | |
ID | 3680335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5610169 |
End bp | 5611827 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637719834 |
Product | glycoside hydrolase family protein |
Protein accession | YP_324972 |
Protein GI | 75910676 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGC CCATTGAATT TACCTTATTT GCACCCTATA ACAAAGGAGC AGCATTAATT GCCTCATTTT CCGATTGGCA AGAAATTCCT ATGCAAAAAG GTGATGATGG TTATTTTCGC GCAACTATTG AATTAGAAGA TGGTACATAT CAATATAAAT TTCGTGTACA AACAAGATCA TGGTTTTTTG AAGAAGATCA ATGGGTAGAT GTTACAGACC CTTATGCTAC TGATATTGAT GAATCAAGTG GTAAAGATAA TGGCATCATC AAAATAAAAG ATGGTGAAAA AATTGTTGAT ACATATGTTT GGCAACATGA TGATAAACCT TTACCTGCTG ACCACGAATT AGTTATTTAT GAATTACACG TAGGTGACTT TTCTGGTGGA GAAGATGACC TTTATGCACG GGGCAAATAT AAACACGTTA TTGAAAAGTT AGATTATTTG TGTGAATTGG GCATCAATGC CATTGAGTTG TTACCAGTAA AAGAATATCC AGGTGATTAT AGTTGGGGTT ATAATCCTCG CTATTTCTTT GCTACTGAAT CCAGCTATGG TTCTACAGCT GATTTAAAAA AATTGGTTGA TGAATGCCAT CAACGAGGTA TTCGCATCAT TATGGACGGG ATTTATAACC ACTCCGAAGC ATCCAGTCCA TTAACACAAA TTGACCATGA CTACTGGTAT CACCATGAAC CACGCGACCC TGATAATAAC TGGGGGCCAG AGTTTAATTA CGAACACTAT GATGAAAATT TAGAGACTTA TCCAGCAAGA AAATTTATTG GTGATACTGT CAGATATTGG GTCGGAGAAT ATCATCTAGA TGGTATTCGC TACGATGCAG CAAGGCAAAT AGCCAACTAC GATTTCATGC ACTGGATTGC TCAAGAAGCA AAGAAAACTG CCGGAGCAAA ACCATTCTAT AATGTTGCTG AACACATCCC AGAAACCACT AGCATTACTA ATTTAGATGG GCCGATGGAT GGATGTTGGC ATGATAGTTT TTACCACACC ATTAAAGCTC ATATATGCGG TGACACCTTT GATTTAGAAA GTCTCAAAGA TGTCATTGAC CCTAAACGCC AAGGTTTCTT GGGTGCAACT AATGTTGTGA ACTATCTCAC CAACCATGAC CATGACCATA TCATGGTGGA GCTAGGTAAT CGAGAAATTT TTCACGACGA AGCTTTTAGA AGAGCTAAAC TGGGAACTGC AATTTTAATG ACAGCTGTTG GTGTACCTTT GATTTGGATG GGAGAAGAAT TCGGCGAGTA TAAACCCAAA CAACAAGACC AATCTAAAAT TGATTGGACA CTCTTAGGTA ATGATCTCAA TCGTAGTTTG TTTGATTACT ACAGAGGATT GATAGGTTTA CGTAAGAATA ATCACGCGTT GTATACAGAA AATATTGATT TCATCCACGA AAATCCAGAA GCCAAGGTGT TAGCCTACAG CCGTTGGAAT GATGAAGGTT CTCGTGTGGT AGTGGTGACG AATTTCTCCG AAGACTTCCT CGCCGGTTAT CATGTCCCTA ATTTCCCCTC TGGTGGTACA TGGCATGAGT GGACTGGCGA CTATGATGTT GAAGCTGGTG ATGATGGTAT CATCACTGAT ATCGGGCCTT ATGAAGCTAA GGTATTTGTT TGGCAGTAA
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Protein sequence | MAKPIEFTLF APYNKGAALI ASFSDWQEIP MQKGDDGYFR ATIELEDGTY QYKFRVQTRS WFFEEDQWVD VTDPYATDID ESSGKDNGII KIKDGEKIVD TYVWQHDDKP LPADHELVIY ELHVGDFSGG EDDLYARGKY KHVIEKLDYL CELGINAIEL LPVKEYPGDY SWGYNPRYFF ATESSYGSTA DLKKLVDECH QRGIRIIMDG IYNHSEASSP LTQIDHDYWY HHEPRDPDNN WGPEFNYEHY DENLETYPAR KFIGDTVRYW VGEYHLDGIR YDAARQIANY DFMHWIAQEA KKTAGAKPFY NVAEHIPETT SITNLDGPMD GCWHDSFYHT IKAHICGDTF DLESLKDVID PKRQGFLGAT NVVNYLTNHD HDHIMVELGN REIFHDEAFR RAKLGTAILM TAVGVPLIWM GEEFGEYKPK QQDQSKIDWT LLGNDLNRSL FDYYRGLIGL RKNNHALYTE NIDFIHENPE AKVLAYSRWN DEGSRVVVVT NFSEDFLAGY HVPNFPSGGT WHEWTGDYDV EAGDDGIITD IGPYEAKVFV WQ
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