Gene Ava_4424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4424 
Symbol 
ID3680455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5539529 
End bp5540242 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content44% 
IMG OID637719777 
Productrubrerythrin 
Protein accessionYP_324917 
Protein GI75910621 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTAT CAAACTTTAC TACACTGCAA AACTTAGAAG CTGCCTTTGG TGGTGAATCA 
ATGGCAAATC GTAAGTATTT ATTTTTTGCC GAAGTAGCCC GTAAACTGGG ATTTACAGAT
TTGGCTAAAC TATTTCGGGA AACAGCAGAG CAAGAAACAG AACACGCTTT TGCCCATTTT
GAGTTACTGC ATCCCGAATT GGTTGTAGAA AATCCGTCTG CCTTAACTGA CGAACAAAAG
CGAGAAATTG TCTCTCGGTG TTTATCTTTG GCTATTGAAG GCGAAACCTA CGAATACACT
ACAATGTATC CTGATTTTGC CGCAGCTGCC CAAAGCGATC GCGATCATCC GGCGGCGGAA
GAATTTCTCA AACAAGCGCA AGAATCTAGC GAACACGCCA GCACTTTCCG CGAAGCTGCA
CACCGCTTTG GTTTATTGAA GTTTATCGAA AATTACCACG CCGATCGCTA CACTGAAGCA
TTAGAAGTAT TAAATGGTGG ACAACCTGTT ACCAGAGTAG TTGGTGAAGA TCCCAACACT
CGTAAATGGA TTTGCAGACA ATGCAGTATG ATTTATGATC CTGTTGCAGG TGATCCCGAT
TCTGGAATTG CGCCAGGTAC GCCATTTGAA GATATCCCTG ACGATTGGCA ATGTCCGATT
TGTGGCGCTA CCAAAAAGAC ATTTAAGCTA CTTGAGGAAA AAACTGCGGC TTAG
 
Protein sequence
MDLSNFTTLQ NLEAAFGGES MANRKYLFFA EVARKLGFTD LAKLFRETAE QETEHAFAHF 
ELLHPELVVE NPSALTDEQK REIVSRCLSL AIEGETYEYT TMYPDFAAAA QSDRDHPAAE
EFLKQAQESS EHASTFREAA HRFGLLKFIE NYHADRYTEA LEVLNGGQPV TRVVGEDPNT
RKWICRQCSM IYDPVAGDPD SGIAPGTPFE DIPDDWQCPI CGATKKTFKL LEEKTAA