Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4189 |
Symbol | |
ID | 3680992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5247270 |
End bp | 5247938 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637719536 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_324683 |
Protein GI | 75910387 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00898811 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTATTT CATCCTGGTT TTCTAGAATC TCTACTATTG CCCTCTCAAT TTTCTTTAGC TTAACGATAT TTAGCTCACC CGCTAACGCC TTTGTTGCTT CGGATCAGGC TAAGTTACTG GTAACAAATA CCTGTGTTAA TTGCGATCTA TCAGGAGCCG ATCTATCGAA TAAAGATTTA TATGGCAGCG CACTCAGTGG GGCAAATCTC TCCAACGCAA ATCTCTCCAA TACCCTACTC AATGATGCAA AGCTAAACGG AGCTAATCTA TCAGGAGCTA ATCTATCAGG AGCTATCTTG ATGGGAACCA TTTTCTCTAA TGCCAACCTA ACGGGGGCTA ATCTTTCTCA GGCAGATTTG TATAATGCCC TGCTGGATAA GACAACATTA TTAAACGCTA ATTTAGGTGA TGCAGATTTA ACAGAGGCAG TTATCATTGA TGCAGATTTG TCTAATGCTT TGGGGAAAAA TACCAAGCTC AAAGGAGCAG TTCTTTCTAG AGCAAATTTA TCGAATGCAG ATTTTTCTAG TAGTTACATG AGAAATACGA GATTATCATC TGCCATTCTT AAGGGAGCTA AATTCTCTGG AGCCGACCTG TCCAATTCTC TGATGCCTGA CGGGACTACT TATAACGGAA GTGTCTCTAA GTTTGGAGCT ATTCAGTAA
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Protein sequence | MSISSWFSRI STIALSIFFS LTIFSSPANA FVASDQAKLL VTNTCVNCDL SGADLSNKDL YGSALSGANL SNANLSNTLL NDAKLNGANL SGANLSGAIL MGTIFSNANL TGANLSQADL YNALLDKTTL LNANLGDADL TEAVIIDADL SNALGKNTKL KGAVLSRANL SNADFSSSYM RNTRLSSAIL KGAKFSGADL SNSLMPDGTT YNGSVSKFGA IQ
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