Gene Ava_3863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3863 
Symbol 
ID3678503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4811468 
End bp4812511 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content40% 
IMG OID637719215 
Producthypothetical protein 
Protein accessionYP_324363 
Protein GI75910067 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.596541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAG GGCAATGGTT AGGATTATTG GCACTGGTTA TTTCACTTTA TATCCTTTGG 
GAAATTCGTC AGTTAGTGCT GCTGTTGTTT ACTTCTGTAG TATTGGCAGT AGCAATTAAT
CAACTGGTTT TGCGGTTGCA GTTGTCTGGA ATTAAACGTA TTTGGGCAGT TCTTTTAAGT
GTGGGTATTG TCGTTACATT TTTAGTTGGC GCTTTATTAT TGATTTTGCC TCCATTTATC
GAGCAGTTCC GGCAATTATT GGTACTTTTA CCAACTGGGA TAAATCAAAT TCAACAGGGT
ATCAACTGGT TAGAAGAACG TCTTGTAGAT AGTTATTTAC CAGAAATTCC CGATATCGAT
AGGCTACTGG AACAGATACA GCCTTGGGTT ACGAGGTTAA CACAGCAGGC GATCGCTCTA
TTTTCTACTT CGGTAACGGC ATTGTTAGAA ACCTTACTCG TCATAGTACT AACTTTAATG
CTGCTAGCTA ATCCCCAGCC ATACCGCAGA GTTTTTATCC GGTTTTTTCC TAACTTTTAT
CGCCATAGGG TGGATGAAAT TCTCACGCGT TGCGCGACAG GTTTGGGTGA TTGGACAATT
GGCGCTTTGA TTGAAATGTT ATTTATTGGT ACCCTCAGTG GACTAGGGCT ATGGATTTTA
CAAGTACCAT TAGCATTAGC TCACGCAGTT TTAGCAGGCT TACTCAACTT TATTCCCAAT
ATTGGCCCAA CTTTGAGCGT ATTTTTGCCA ATGGCGATCG CTTTTCTGGA TGCGCCTTGG
AAAGCTGTGG CAGTTTTAAT TTTATATCTC GTGATTCAAA ATGTTGAAAG TTATTGGCTC
ACGCCAACAA TCATGGCAAA ACAAGTAGCG CTGTTACCTG CTGTCACCTT AACAGCACAA
ATTGTCTTTG TTACTCTTTT TGGTGCGTTA GGATTACTGT TGGCTTTACC TCTAGCCGTC
GTGGCCAAGA CTTGGATACA AGAGGTGTTA TTTAATGATA TTTTGGATGA GTGGCAACCA
AGTAATTCCT CTAATCTTTA TTGA
 
Protein sequence
MKLGQWLGLL ALVISLYILW EIRQLVLLLF TSVVLAVAIN QLVLRLQLSG IKRIWAVLLS 
VGIVVTFLVG ALLLILPPFI EQFRQLLVLL PTGINQIQQG INWLEERLVD SYLPEIPDID
RLLEQIQPWV TRLTQQAIAL FSTSVTALLE TLLVIVLTLM LLANPQPYRR VFIRFFPNFY
RHRVDEILTR CATGLGDWTI GALIEMLFIG TLSGLGLWIL QVPLALAHAV LAGLLNFIPN
IGPTLSVFLP MAIAFLDAPW KAVAVLILYL VIQNVESYWL TPTIMAKQVA LLPAVTLTAQ
IVFVTLFGAL GLLLALPLAV VAKTWIQEVL FNDILDEWQP SNSSNLY