Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3710 |
Symbol | |
ID | 3678796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4618705 |
End bp | 4620096 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637719060 |
Product | retinal pigment epithelial membrane protein |
Protein accession | YP_324210 |
Protein GI | 75909914 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACAA CAGCAGTCAA TCCCTATCTA GAGGGTAATT TTGCACCTGT CCACGAAGAA ATTACCACTG ACACCTTAAA AGTTATCGGC GAACTTCCCC CTGATTTATC AGGGATGTTT ATCCGCAACG GCCCGAACCC TCAATGGACA CCCATCGGAC AATATCACTG GTTTGATGGT GATGGGATGT TACACGGTGT CAGAATTAGT AATGGTAAAG CTACTTATCG CAATCGCTAC GTCCGCACTC AAAGATGGCA AATTGAACAT GAGGCGGGTC AAGCCATCTG GACAGGATTT ATGGAACCAC CCCAGCCAGA ACTCCCCAGT AGAAACACTG GAAATACTGC CCTTATCTGG CACGCGGGAC AACTATTAGC ATTATGGGAA GGCGGCGCGC CCCATGCAAT TCAAGTTCCT GATTTAGAAA CTATTGGTGA GTACACCTAC AATAACCAGC TAAGTTCTGC TTTTACCGCC CATCCTAAGG TAGACCCAGC AACAGGGGAA ATGATGTTTT TCGGCTACTC ATTTGCACCA CCATATCTGC ATTACAGCGT GGTTTCCGCC ACCGGGGAAT TGGTGAGAAC AATACCTATA GATTTACCAA TGGGGGTGAT GATGCACGAC TTTGCTATCA CTGCCAACTA CACAATTTTT ATGGATTTGC CCTTGACCTT TAGTGTAGAA CGGATGCAAC GGGGAGAACC TATGCTAATG TTTGAGAGCG ATCGCCCTAG TCGCTTTGGT ATTCTACCTC GTCATGGTGA CAATAGTCAT ATTCGCTGGT TTACAGCTCC ATCTTGCTAC GTTTTCCACA CTCTCAACGC CTACGAGGAC AAAGACGAAG TAGTACTTTT TGCCTGTCCC ATGCGTTCCA CCACCGTCCT AGCTTCCCCA GATTCCCAAA CAGACCCAGA AGCAGACATT CCCCGTTTAC ATCGTTGGCG CTTTAACCTC AAAACTGGGA AAGTACATGA AGAAATGCTG GATGATGTCG CCTCAGAATT TCCCCGTATC AATGAAAATT TCTTAGGACA AGCAACGAAA TATGGCTACA CTAGTCGGTT AGCAAAAGGT TCTATACCTT TGTTTGAGGG TTTAATTAAA TACGACCTCA GCAATGCTAA GTCCCAAAAT TATGAATATG GACAAGGACG TTATGGGAGT GAAGCTGTTT TTGTACCTCG TCCTGGTGCA ACAGTTGAAG ATGATGGTTG GTTAATCACT TACGTTTATG ATATTGGTGA GGATAGTTCT GAATTAGTTG TCATAAATGC CCAAGATATT AATAGTGAAC CGATAGCGCG AGTGCTACTT CCCCAACGAG TACCTTACGG TTTTCATGGT ATCTGGGTTA CTGAAGAACA GTTGAATTTT GGAAGAATAT AA
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Protein sequence | MTTTAVNPYL EGNFAPVHEE ITTDTLKVIG ELPPDLSGMF IRNGPNPQWT PIGQYHWFDG DGMLHGVRIS NGKATYRNRY VRTQRWQIEH EAGQAIWTGF MEPPQPELPS RNTGNTALIW HAGQLLALWE GGAPHAIQVP DLETIGEYTY NNQLSSAFTA HPKVDPATGE MMFFGYSFAP PYLHYSVVSA TGELVRTIPI DLPMGVMMHD FAITANYTIF MDLPLTFSVE RMQRGEPMLM FESDRPSRFG ILPRHGDNSH IRWFTAPSCY VFHTLNAYED KDEVVLFACP MRSTTVLASP DSQTDPEADI PRLHRWRFNL KTGKVHEEML DDVASEFPRI NENFLGQATK YGYTSRLAKG SIPLFEGLIK YDLSNAKSQN YEYGQGRYGS EAVFVPRPGA TVEDDGWLIT YVYDIGEDSS ELVVINAQDI NSEPIARVLL PQRVPYGFHG IWVTEEQLNF GRI
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