Gene Ava_3622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3622 
Symbol 
ID3679256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4515100 
End bp4515939 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content45% 
IMG OID637718973 
Producturease accessory protein UreD 
Protein accessionYP_324123 
Protein GI75909827 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0829] Urease accessory protein UreH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.768941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCA ATTCACAGCC AATAGAAGGC TGGCATGGCA AACTTGATTT AGTTTATGCC 
GATCGCTCAA ATTCTACCCA GTTAATTTAC AATCACCAGC AAGCACCGCT AAAAGTACAG
CGTCCCTTTT ATCCAGAAGG GGAAAAAGTT TGTCATAGCG TGATTTTACA TACGGCTGGG
GGTGTGGTGG GAGGCGATCG CTTATCTTAT AACCTCCACC TCCAACCCAA CGCACAAGCT
TTAATTACCA CCGCCGCCGC AGGGAAAATA TATCGCAGCG AAGGCTTACA AGCCAGACAA
ACCATAGATA TAAAAATTGA TGCGGGTGCT TGTTTAGAAT GGCTACCGCA AGAAACGATT
TTATTTAACG GGGCAATTTA TCGCCAAGAT TTACGGGTAG AATTAGCCAC TGGCGCTAAT
TTTTTAGGCT GGGAAATTAC GCGATTTGGT CGTAGTGCTA GAGGAGAGAA ATTCTACCAA
GGAGAATGGC GATCGCATAC AGAAATTTGG CGACAAGGCG TTCCTTTGTG GATAGACCGT
CAATGGCTAC CGGGGAACGA AGCTGTTTTT CACAGTCCTC ATGGTTTGGC TGGGCAACCA
ATAGTGGGTA GTCTAGTTTG GTTGGGTAGT GCGGTTTCCA CAGAAATCAT CGCCAAAGCC
CGAAATTTAG GGAATACTCA AGGCGAAAAA GGCGTTACAA GTTTAGAAAA TGGATTTTTA
TGTCGATATC GTGGTGCTTC CACATCTGAG GTGAGAAACT GGTTTACAGA TGTTTGGCAA
TTGCTGCGAG TTGAGTTTTT CAGTCGTAGT AAATGTACAC CCAGAGTGTG GCAAACTTAA
 
Protein sequence
MAFNSQPIEG WHGKLDLVYA DRSNSTQLIY NHQQAPLKVQ RPFYPEGEKV CHSVILHTAG 
GVVGGDRLSY NLHLQPNAQA LITTAAAGKI YRSEGLQARQ TIDIKIDAGA CLEWLPQETI
LFNGAIYRQD LRVELATGAN FLGWEITRFG RSARGEKFYQ GEWRSHTEIW RQGVPLWIDR
QWLPGNEAVF HSPHGLAGQP IVGSLVWLGS AVSTEIIAKA RNLGNTQGEK GVTSLENGFL
CRYRGASTSE VRNWFTDVWQ LLRVEFFSRS KCTPRVWQT