Gene Ava_3581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3581 
Symbol 
ID3679527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4459977 
End bp4460903 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content43% 
IMG OID637718932 
Productauxin efflux carrier 
Protein accessionYP_324082 
Protein GI75909786 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0109429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATAAATC TCCTAGAACT ATACGTCAAA CTTGTCAGCT TAGTCTTAGT AGGTTTTATT 
CTGGGACGCA AGCTACCTAG TACAGTTCCT ACCCGTCTGG GTCAGTTTCT TTTCTGGGTG
GGAGTACCGA TAAGTATAGT ATCTTTTCTC CGACAAACTG ACTTATCAGG ACAAATCTGG
ATTGCTCCGG CGATCGCATA CTTGGCTATT CTACTAGGTG CGTTCTTCGC TTGGCTAGCA
ATCAAAGGAC AGACATACTT CAGTAATACA ACACCGGAAA AACCTACCCA GGGAAGCTTG
TTACTAGCAG CCATGATAGG TAACACAGGT TACTTAGGCT TTCCCATTAC CTTAGCAATG
GTAGGTAAAG AATACTTTGC TTGGGCATTA TTTTACGATT TACTGGGGTC TTTTCCTGGT
GCTTATGCCT TGGGCGTAGC ATTAGGCGCT CATTTCGGTA CTAACTTACA CAATCACAAC
CAATTTACGC AAGTAACAAG AGCTATTATT ATTAATCCGG CTCTATGGAG TTTCGGATTT
GGCTTACTAT TTCGCCAAAT AGCCATTCCT GAAATTTTGG AATATGGCTT AGATAAATTT
GCCTGGAGTA TGGTGGCTTT ATCTCTAGTA TTAATTGGAA TGCGCTTAAG CAAACTAAAT
TCCTTAGCTA ACCTACCGCA GGTAGGTATC AGCTTAGGAA TCAAAATGCT GATAGTTCCC
CTAATTTTAG GCTACACCTT ACCGCTTTTT GGATTAACCG GGCCAGCCGC CAAAGTGATT
ATCCTGCAAA CGGCCATGCC CCCAGCCTTT GCCTGTCTAG TAATCGCCGA AACTTTCAAT
TTAGACCACA ACCTCGCAGT CACCACAATA GCCGTGGGAG CTATGTTACT ACTCCTAACG
CTCCCCATGT GGCTATGGTT GTTTTGA
 
Protein sequence
MINLLELYVK LVSLVLVGFI LGRKLPSTVP TRLGQFLFWV GVPISIVSFL RQTDLSGQIW 
IAPAIAYLAI LLGAFFAWLA IKGQTYFSNT TPEKPTQGSL LLAAMIGNTG YLGFPITLAM
VGKEYFAWAL FYDLLGSFPG AYALGVALGA HFGTNLHNHN QFTQVTRAII INPALWSFGF
GLLFRQIAIP EILEYGLDKF AWSMVALSLV LIGMRLSKLN SLANLPQVGI SLGIKMLIVP
LILGYTLPLF GLTGPAAKVI ILQTAMPPAF ACLVIAETFN LDHNLAVTTI AVGAMLLLLT
LPMWLWLF