Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3581 |
Symbol | |
ID | 3679527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4459977 |
End bp | 4460903 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637718932 |
Product | auxin efflux carrier |
Protein accession | YP_324082 |
Protein GI | 75909786 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0109429 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATAAATC TCCTAGAACT ATACGTCAAA CTTGTCAGCT TAGTCTTAGT AGGTTTTATT CTGGGACGCA AGCTACCTAG TACAGTTCCT ACCCGTCTGG GTCAGTTTCT TTTCTGGGTG GGAGTACCGA TAAGTATAGT ATCTTTTCTC CGACAAACTG ACTTATCAGG ACAAATCTGG ATTGCTCCGG CGATCGCATA CTTGGCTATT CTACTAGGTG CGTTCTTCGC TTGGCTAGCA ATCAAAGGAC AGACATACTT CAGTAATACA ACACCGGAAA AACCTACCCA GGGAAGCTTG TTACTAGCAG CCATGATAGG TAACACAGGT TACTTAGGCT TTCCCATTAC CTTAGCAATG GTAGGTAAAG AATACTTTGC TTGGGCATTA TTTTACGATT TACTGGGGTC TTTTCCTGGT GCTTATGCCT TGGGCGTAGC ATTAGGCGCT CATTTCGGTA CTAACTTACA CAATCACAAC CAATTTACGC AAGTAACAAG AGCTATTATT ATTAATCCGG CTCTATGGAG TTTCGGATTT GGCTTACTAT TTCGCCAAAT AGCCATTCCT GAAATTTTGG AATATGGCTT AGATAAATTT GCCTGGAGTA TGGTGGCTTT ATCTCTAGTA TTAATTGGAA TGCGCTTAAG CAAACTAAAT TCCTTAGCTA ACCTACCGCA GGTAGGTATC AGCTTAGGAA TCAAAATGCT GATAGTTCCC CTAATTTTAG GCTACACCTT ACCGCTTTTT GGATTAACCG GGCCAGCCGC CAAAGTGATT ATCCTGCAAA CGGCCATGCC CCCAGCCTTT GCCTGTCTAG TAATCGCCGA AACTTTCAAT TTAGACCACA ACCTCGCAGT CACCACAATA GCCGTGGGAG CTATGTTACT ACTCCTAACG CTCCCCATGT GGCTATGGTT GTTTTGA
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Protein sequence | MINLLELYVK LVSLVLVGFI LGRKLPSTVP TRLGQFLFWV GVPISIVSFL RQTDLSGQIW IAPAIAYLAI LLGAFFAWLA IKGQTYFSNT TPEKPTQGSL LLAAMIGNTG YLGFPITLAM VGKEYFAWAL FYDLLGSFPG AYALGVALGA HFGTNLHNHN QFTQVTRAII INPALWSFGF GLLFRQIAIP EILEYGLDKF AWSMVALSLV LIGMRLSKLN SLANLPQVGI SLGIKMLIVP LILGYTLPLF GLTGPAAKVI ILQTAMPPAF ACLVIAETFN LDHNLAVTTI AVGAMLLLLT LPMWLWLF
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