| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3535 |
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| Symbol | |
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| ID | 3679559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 4394435 |
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| End bp | 4399849 |
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| Gene Length | 5415 bp |
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| Protein Length | 1804 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637718887 |
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| Product | Serine/threonine protein kinase and Signal transduction histidine kinase (STHK) with GAF sensor |
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| Protein accession | YP_324037 |
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| Protein GI | 75909741 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.655347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTC AACAATATTC CAACCCCATC ATCACCGGAT ATCAAATTAG TTCTCAACTA
TATGCCGGTT CCAAAACAAG AGTATATCGA GCTATCCGCG AGCAAGACCA GCTCCCAGTA
GTCATTAAAG TTCTAGCTTC CGATTATCCC AATTTCCAAG AATTACTACA GTTTCGCAAT
CAATACACTA TTAGCAAAAA TCTCAACGTT ACTGGGATCA TTCGCCCCTT ATCATTAGAA
ACCTATGGTA ACGGTTATAT TTTGGTGATG GAAGACACAG GAGGTATTGC TTTACGAGAA
TACATCAAAA CTGCTCCCCT TCCCCTAGTA GAATTTTTGG CGATCGCTAT CCAAATAACC
AGTATTCTGC AAGAACTACA CCTCAATCGT GTAATTCACA AAGATATCAA ACCCGCAAAC
ATCCTGATTC ATCCCCAAAC AAAACAAGTT CACCTGATCG ACTTTAGCAT CGCTTCATTA
TTACCTAAAG AAACGCAAGA AATCAGAAGT CCCAATGTTT TAGAAGGAAC TCTCGCTTAT
ATTTCCCCCG AACAAACCGG CAGAATGAAC AGAGGAATCG ACTACCGGAG CGATTTTTAT
TCATTGGGTG TAACACTTTA TGAACTATTG ATGGGAGAGT TACCATTTAG TTCTGATGAT
CCGATGGAGT TGGTGTATTG TCACATAGCG AAAACACCGA TCGCCTTGGG ACACCAACAA
CATATTCCCC TAGTGTTATC TGATATCATC ATGAAGCTGA TGGCGAAAAA TGCCGAAGAT
AGGTATCAGA GTGCTTTGGG ATTAAAGCAT GATTTAGAAA CTTGTTTGTA CCAATGCAAA
AATAACGGCA AAATTACAGC TTTTGAAATT GGTAAACGGG ATATGTGCGA TCGCTTTCTC
ATTCCCGAAA AGCTTTATGG GCGAGAAACG GAAGTTAAAG TCTTACTGCA AGCTTTTGAG
CGTGTCACCA AAGGCAAATC AGAAATGATG TTAGTGGCAG GATTTTCGGG TATTGGTAAA
ACCGCCGTCG TTAACGAAGT TCACAAGCCT ATTACCCGTC AACAAGGGTA TTTCATCAAA
GGTAAATTTG ATCAGTTCAA TCGCAATCTT CCCTTATCAG CCTTTGTGCA AGCCCTGCGA
GATTTAATGG GGCAATTGTT ATCAGAATCA GACTCGCAAT TATCTAAGTG GCGCACCAAG
ATCCTAGATA CTGTAGGCAA TAACGGACAA GTGCTAATTG AGGTGATTCC CGAACTAGAA
ATCATCATCG GTAAACAACA CCCTGCGCCG GAACTGTCGG GAATAGCCGC CCAGAATCGC
TTTAACTTAT TGTTCCAAAA GTTTATTGCA ATTTTTAGCA CCCCAAAACA TCCCTTGGTG
ATGTTTTTAG ATGACTTACA GTGGGCAGAT ACGGGTTCCC TACAGTTGAT CAAACTGCTG
ATGGAGGATC AGAGTTATCT CCTGTTGTTG GGGGCTTATC GAGATAATGA AGTCCACACC
GCCCACCCGT TGATTTTGAC AGTAGAAGAA TTGAAAAAAG CGGGAAAAAC TGTTAATAAA
ATTACTCTCG CCTCCCTGAC CTTGTGTGAT ACGAATCATT TAGTTGCTGA TACCCTGCAT
TGTCAAGCAG AGCGATCGCA TCCCCTGACA GAATTAATTG AGCGTAAAAC CAAAGGTAAT
CCCTTTTTTA TCACCCAGTT TCTCAAGGCG TTACACGAAG ATCAGCTGAT TACTTTTAAT
CGCCATCAAG GTTATTGGGA ATGTGATATT ACCCAAATCA ATGAACTATC CCTCACTGAT
GATGTGGTGA AGTTTATGGC ACAAAAGTTG CAGAAATTTC CTAGTAAAAC ACAAGATGTA
CTCAAGTTAG CAGCTTGTAT TGGTAACTCT TTTGATTTAA ATACCTTAGC AATTGTTTTA
GAAAAATCAG CAGCAGATAC GGCAGATGCT TTATGGAAAG CTTTACAGGA AGGATTAATT
CTGCCTCAAA GCGAAGTCTA CAAATTTTAT TTGGATCATG ATCGCCAAGA TGCCCATGTT
AACAATAGCC AAAATGTGGA ATATCGATTT TTACACGATC GCGTCCAACA AGCTGCTTAT
TCTTTGATTC CCCAAGACCA AAAACAAGCG ACTCATTACC AAATCGGACA ACTGCTGTTA
AAACAGATTT CTCCAGTCGC TAGAGAAGAG CGAATTTTTG AACTGGTCAA TCAACTCAAT
TACGGAGTTG CTTTAATTAC CCAACAAACA GAACGAGATG AATTAGCCCA ACTCAATCTC
ACTGCCTGTC GTAAAGCCAG GAGTGCCACA GCTTATCAAG CGGCTCATGA ATATATTACC
GTGGGGTTGT TATTGTTGGG CGAGAAAGCT TGGCAGCACC AGTATGAAAT CACCTTGCAT
CTACATGAAT TTGCGGCGGA AGTCGCTTCT CTGCGTGGTG ACTTTGCACA GATGGAACAG
TTTATTAATA TCGTCACCGC CCAAGCGCAC ACTTTAATTG AACAGGTTAA CGTTTACCGT
ATTAGGATTC AAGCTTATAT TTCCCAGAAT AAATTTGCCG AAGCAATTGC CATCGCCCAA
AAAATCTTAC AACAGTTGGG GGTAACCTTT GCTGAAGCAA CCACACCAGC AGTTATTCAA
CAGGAAATCC AAGAGATTAG GGAACTGATT GGTGACAGAG CAATTGCAGA TTTAGTTCAC
CTACCCATCA TCACAGATGA GGAGAAAGTT GCCATTGTCC AGATTGCCAG TAGCATCATG
ACAGTGGCTT ACCTCTCCGG CTCTCCCCTG TTTCCATTAA TCACTTTGCT GTTAGTCAAA
ATATCCATCC AGTACGGAAA TACACCAGCT ACAGGGTATA TCTATAGTAC TTATGGTGTG
CTGCTGTGTA ATGTTTTGCA AGATGTGGAT ACAGCAACCG AGTTTGGTCA ATTAGCACTG
CAAATAGTGT CAAAAGTGGA CGCTAAGGCG ACTCAACCCC AAGTTTTGCT AGTTTTGGCA
TTGTATATTT TACAACGCAA ATCTCATGTC CAAGAGATTT TACCACTCTT GCAAAAAGGC
TATGCGATCG CTCTAGAAGT GGGCAACCTA GAGTTTGCCG GTCATCATGC CCACAATTTT
TGTAGCCATT CTTTTTGGTG TGGTCAGCAC CTTGCCACTT TACAAGAAGA TGCTCGCGCC
TACAGCAATG AGTTGGAGCA ACTCAATCAA ATAACAACAG CCAATTATGT CCGCATTTAT
TGGCAATCTA CACTAAATTT ACTTGGTTTT GCTGTCCATC CCACCATCTT GTCTGGGGAA
GCCTTGCAAG AACAAGAATT TATCCCTCTG TTAATAGCTG CCAATGATGG GTATGGGTTG
TATATTTTCT ATTTGTACAA GCTGATGCTG TGCTACTTGT TTGGCGAAAT TGAGACAGCG
AAAAGCATTA CTATTAAGAT TAAAGATCAT TTAATGGCTG CTGCTGGACT TTTCTGTGAA
CCAATATTTT ATCTCTATGA TTCTCTGATT GCTTTAGCAC AGTTAAGACA AAATTCAGAA
GAAGTATCAG CCACATTACA GTACGTTGCA GAAAACCAAG CCAAGTTACA ACGATGGGCG
CAATATGCCC CCATGAATCA CCAGCATAAA CTTGATTTAG TGGCAGCAGA AAGATATCGA
GTTTTGGGTG AAAAAACCTC AGCAATTGAA TATTACGATC ACGCTATCTC CGGAGCCAAA
AAATCCCAAT ACATTCAAGA AGAAGCACTC AGCAATGAGC TAGCAGCTAA ATTTTACTTG
GACTGGGGCA AAGACAAAGT TGCCCAGATA TATATGCAGG AGGCATATTA TTGTTACGCA
CGTTGGGGCG CAAAAGCTAA AATTGATAAC TTAGAAAAAC TCTACCCTCA ACTGCTTAAA
CCCATCTTGC AACGGCGACA ACTCAACCTT AATCCCTTAG AAACTATTGC ACCGATTAAC
CGCAACACCA TCGCCGTCCC AACTGACACT GCTGGCACAA GTAGCACTAG TATTTCTGAT
ATCCTGGATT TTACTTCTGT TCTCAAAGCT GCTCAAGCAA TATCCAGCAC CATCGAATTA
GAAGAATTAA TTGTCAATTT GACAAAAATT ATCCTCGAAA TTTCTGGAGC TAAAAAGATT
GTTTTAATCC TTCCCCAAGA CAATGCTTGG TATGTTCGAG CAATTACTTT TATTAGTTAT
GAAAACAAAC CAGAAGGAAA AATTCAAAAC ATTCTACTTC TACAACCAAT TGATACTTGT
AAACATATCC CTGGAACAAT CATTAATTAT GTTAAAAACA CCCTGGAAAC TCTGGTAATC
GATAATTATC AAATAGATAT TCCTGGGCTA ATAGATCAAT ATCTCCTCAA ACATCAACCG
AAAAGTGTAT TATGTCAGCC AATTATTAAA CAAAGCAATT TATTAGGCAT TTTATATTTG
GAGAATCAAA TTACCTCTGG AGTATTTACC CTAGAACGCT TGCAAGTAAT TAACTTGCTT
TCCTCTCAAG CAGCTATATC TCTAGAAAAT GCTTGCCTGT ATCAAAAAGC TCAACAAGCA
TTACAAGATT TACAAGCAGC CCAATTACAA ATTATCCAAA GTGAGAAAAT GTCTGCCTTG
GGTAATTTAG TGGCTGGAGT AGCCCATGAA ATGAATAATC CTTTGGGTTT TATTACCGCG
ACTTTAAAAC AAGCTAAACC CACAATTGCC GATATTGCTG AACATCTAAG ATTATACCAA
GCAAATTTCC CCAACAAAAG TGCAGAAATT ATTAACCATG CTGAAGAAAT TGACTTAGAT
TATAGCTTAG AAGATTTGCC AAAGATGATA GATGCAATGG TGATGGCTAG CGACAGACTA
AAAAATATCA GCACCAGCTT AAGAACTTTC TCCCGTGCCG ATACAGACCA TAAAGTAAGC
TTTAATGTCC ACGAAGGTAT AGACAGTACC ATTCTTATTC TCAAGCATCG GCTCAAAGCT
AATGAACAAC GTCCCGCCAT TGAGGTGATA ACTGATTATG GTAATTTACC TCAAATTGAA
TGTTTTCCTG GGCAATTAAA CCAGGTGTTT ATGAATATTC TAGCCAATGC TATTGACGCA
TTAGAAGCAA CAAATAAAGG ACAAACTCTT GAGGAAATAA AAGCTCATCC TCACCAAATT
ACAATTACTA CTACAGTTAA TAATGACCAA GTGAAAATTA TCATTGCTGA TAATGGCATT
GGGATGGATG AACAAGTGAA ACAAAAAATC TTTGACCACT TATTTACTAC GAAAGCCGTT
GGTAAAGGTA CAGGTCTAGG ACTAGCGATC GCCCGTCAAA TTGTCGTAGA AAAACACAAT
GGTTCACTAT TTGTAAATTC TCAACTCGGT GCAGGGACTG AATTTGTCAT CACCTTACCG
ATTATCACTC GTTGA
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| Protein sequence | MATQQYSNPI ITGYQISSQL YAGSKTRVYR AIREQDQLPV VIKVLASDYP NFQELLQFRN
QYTISKNLNV TGIIRPLSLE TYGNGYILVM EDTGGIALRE YIKTAPLPLV EFLAIAIQIT
SILQELHLNR VIHKDIKPAN ILIHPQTKQV HLIDFSIASL LPKETQEIRS PNVLEGTLAY
ISPEQTGRMN RGIDYRSDFY SLGVTLYELL MGELPFSSDD PMELVYCHIA KTPIALGHQQ
HIPLVLSDII MKLMAKNAED RYQSALGLKH DLETCLYQCK NNGKITAFEI GKRDMCDRFL
IPEKLYGRET EVKVLLQAFE RVTKGKSEMM LVAGFSGIGK TAVVNEVHKP ITRQQGYFIK
GKFDQFNRNL PLSAFVQALR DLMGQLLSES DSQLSKWRTK ILDTVGNNGQ VLIEVIPELE
IIIGKQHPAP ELSGIAAQNR FNLLFQKFIA IFSTPKHPLV MFLDDLQWAD TGSLQLIKLL
MEDQSYLLLL GAYRDNEVHT AHPLILTVEE LKKAGKTVNK ITLASLTLCD TNHLVADTLH
CQAERSHPLT ELIERKTKGN PFFITQFLKA LHEDQLITFN RHQGYWECDI TQINELSLTD
DVVKFMAQKL QKFPSKTQDV LKLAACIGNS FDLNTLAIVL EKSAADTADA LWKALQEGLI
LPQSEVYKFY LDHDRQDAHV NNSQNVEYRF LHDRVQQAAY SLIPQDQKQA THYQIGQLLL
KQISPVAREE RIFELVNQLN YGVALITQQT ERDELAQLNL TACRKARSAT AYQAAHEYIT
VGLLLLGEKA WQHQYEITLH LHEFAAEVAS LRGDFAQMEQ FINIVTAQAH TLIEQVNVYR
IRIQAYISQN KFAEAIAIAQ KILQQLGVTF AEATTPAVIQ QEIQEIRELI GDRAIADLVH
LPIITDEEKV AIVQIASSIM TVAYLSGSPL FPLITLLLVK ISIQYGNTPA TGYIYSTYGV
LLCNVLQDVD TATEFGQLAL QIVSKVDAKA TQPQVLLVLA LYILQRKSHV QEILPLLQKG
YAIALEVGNL EFAGHHAHNF CSHSFWCGQH LATLQEDARA YSNELEQLNQ ITTANYVRIY
WQSTLNLLGF AVHPTILSGE ALQEQEFIPL LIAANDGYGL YIFYLYKLML CYLFGEIETA
KSITIKIKDH LMAAAGLFCE PIFYLYDSLI ALAQLRQNSE EVSATLQYVA ENQAKLQRWA
QYAPMNHQHK LDLVAAERYR VLGEKTSAIE YYDHAISGAK KSQYIQEEAL SNELAAKFYL
DWGKDKVAQI YMQEAYYCYA RWGAKAKIDN LEKLYPQLLK PILQRRQLNL NPLETIAPIN
RNTIAVPTDT AGTSSTSISD ILDFTSVLKA AQAISSTIEL EELIVNLTKI ILEISGAKKI
VLILPQDNAW YVRAITFISY ENKPEGKIQN ILLLQPIDTC KHIPGTIINY VKNTLETLVI
DNYQIDIPGL IDQYLLKHQP KSVLCQPIIK QSNLLGILYL ENQITSGVFT LERLQVINLL
SSQAAISLEN ACLYQKAQQA LQDLQAAQLQ IIQSEKMSAL GNLVAGVAHE MNNPLGFITA
TLKQAKPTIA DIAEHLRLYQ ANFPNKSAEI INHAEEIDLD YSLEDLPKMI DAMVMASDRL
KNISTSLRTF SRADTDHKVS FNVHEGIDST ILILKHRLKA NEQRPAIEVI TDYGNLPQIE
CFPGQLNQVF MNILANAIDA LEATNKGQTL EEIKAHPHQI TITTTVNNDQ VKIIIADNGI
GMDEQVKQKI FDHLFTTKAV GKGTGLGLAI ARQIVVEKHN GSLFVNSQLG AGTEFVITLP
IITR
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