| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3462 |
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| Symbol | |
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| ID | 3679852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 4292627 |
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| End bp | 4295002 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637718814 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_323964 |
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| Protein GI | 75909668 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCTG AAGCAGCATT AGCATGGTTA GACACCATAA TTCCTGCTCA GACCGGGGAA
CGGTTGAGCG ATTTGCAAAA AGTTATTGTT GTGCAGGTTT GGTTGGGTAG GAAATATTTG
GATATTGCCC GTGCTTATGG TTGTACGGAA GGACACGCTA AGGATGCTGG CTCACATTTA
TGGAAACTGC TTTCTCAAGT ACTGCGGCAG AGGATTACCA AGAGTAATTG TCGCGCTACC
TTGGAACGGG TGCTGAGAAA AACTACGGCT ATATCTGGTC TAATTGATTA CCCAAAAGTA
ACCCAACAAC CTACACCTAA GTTAGAGGAT AGCAATTTTT TGGGTAGGGA GGGAGCGATC
GCTCACCTGA ATACTCTGGT AAATCAAGGC TCGAAGGTGA TTGTTATCCA AGGTGAGGGG
GGTTTAGGGA AAACTACTCT CGCTCAACAA TATCTGCAAA CTCAGGGTTT TGAGTTGGTT
TTAGAACTGC TGATGGCGAA GGAAACCCAA AATATCACGC CGGCGGAACG GGTAGTGGAG
GAATGGCTAA AACAAGATTT TGGGGAAGAA CCAGGGGTGG AGTTTGGGGT GACTTTAGGA
CGACTCAAGC GCCAACTGCA CAATCGACGG ATTGGGGTGT TAATTGATAA TCTGGAACCT
GCATTAGATC AACAAGGTGG GTTGATTCCC CTTCACGGCA ATTATGTAGA ATTGTTGCGG
GTTTTGGCTG ATGTTCGGGT GCAGTCGGTA ACGTTGATTA CTAGCCGCGA TCGCCTGTGC
GAACCTGGGT TAAATGTCCA TCATTATCGG CTTCCTGGTT TGGATCAAAG CGCATGGCAA
AAGTTTTTTA GTAGCTGTGG ATTAACTATC AACTTGCCTA CATTGCAACA GATACATCGT
ACATATGGCG GTAATGCCAA AGCAATGGGG ATTCTCTGCG GGGCGATCCT GGAGGATTTC
GGCGGTGATA TGGCACTTTA TTGGCAAGAA CATCATGGTG ATCCTTTAGC CGCAACTGAC
TTAAAGAATT TAGCGGTGAG TCAAATTAAT CGTTTGCAAG CCCTTGATCC CCAAGCCTAC
CGCCTGCTTT GCCGTTTGGG ATGTTATCGT TACCAAGATA TACCCAGTAT CCCCTCTCCA
GGAGTATTTT GTTTACTTTG GGATGTCCCT GCATCTGAAC ATCGTCAACT TATTGCTTCC
CTGAGAAATC GCTCTTTAGT GGAGTGTCAT CAAGGAAAAT ATTGGCTACA TCCAGTAATT
CGTGCCGAGG CGATCGCTCG TTTACGCACT AGTGATGAGT GGGAAATAAC CAATCACAAA
GTTGCTGAAT TTTGGACGGC TAGTGTTTCC AGAATCACCA TATTTCAAGA TGCTTTGCAA
GCTCTAGAAG CATATTATCA CTATATAGAA ATTAATGAAT TTGAGTCGGC AGGCAAGGTA
ATTCTCAAGA GTCGTAATAA TCAATGGCAA CAGTTTTTAC CTTTGGGAAG TACGCTGTAT
CGGATGGGAT TAATTCAGCC GATCATGACT GCTATTAATC AAGTCGTCAA GAATATTGGA
CATGACCAAG ACTTAAGTGA ACTATATAAT ATCTTGGGTG ATTTATATTG GATTACAGGT
GATATTATTC AGGCGATCGC CTGTCAAGAA AAAACTATCG ATTTGACAAC ACAAGCGCTG
AAATCACTCG TACCGCAACC AGGGAATAAA CATAAAGTCT ATTATTTGAG GATGTTAGAG
GTAGATTCTC TCTTAAGTAT TGGTCTTTAT AAAATAGATT TGTGGGAACT AGAAGAGGCT
GCCAAATTAT TTCAACAAGT AATTTACCTA GCCCAAAATA CAGACCATCA TCGCTGGGCA
GAAAAAGCGT CTGTATGTTT AGCCTTAGTC AATTCATACT TAGGCTTATA TGATGCCGCT
TATTTATTAG CAGATGTAGC TTACCAAAAT ATTAAAAACG AAGAAATTCT AGAAACAGGA
AGATTCGCTT ACTTCATGCA AATCTTGGGT CAAACTTATG TGAACTTAGG AGAATTTACC
AAAGCAAAGG AAATGTTTCA TCAAGCATTG ACCTTTGCGG AAGAAAGCCA TTATATGCAG
GTAAAAGCAA AAACCCTGAA TGGATTAGCA GAAATTCATC GCCAACAAGC AGATTATCCA
TTAGCCCTTG CATATCATAC AGAAGCAATT GAACTTTTAG AGAAAATTGG TGCTAAATGT
GACCTAGCCG AAACCTATTT TCAATTAGGT TTAACTTATC AAAAAATGGC AAAATCCGAT
GCCAGCCAAA AGTATTTTGC TCAAGCAACA CATTTATTTA CAGAAATCAA AGCCCCCAAT
CAAGTTGCCA AAATTTCCAT AACTGCCAGT TTTTAG
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| Protein sequence | MDAEAALAWL DTIIPAQTGE RLSDLQKVIV VQVWLGRKYL DIARAYGCTE GHAKDAGSHL
WKLLSQVLRQ RITKSNCRAT LERVLRKTTA ISGLIDYPKV TQQPTPKLED SNFLGREGAI
AHLNTLVNQG SKVIVIQGEG GLGKTTLAQQ YLQTQGFELV LELLMAKETQ NITPAERVVE
EWLKQDFGEE PGVEFGVTLG RLKRQLHNRR IGVLIDNLEP ALDQQGGLIP LHGNYVELLR
VLADVRVQSV TLITSRDRLC EPGLNVHHYR LPGLDQSAWQ KFFSSCGLTI NLPTLQQIHR
TYGGNAKAMG ILCGAILEDF GGDMALYWQE HHGDPLAATD LKNLAVSQIN RLQALDPQAY
RLLCRLGCYR YQDIPSIPSP GVFCLLWDVP ASEHRQLIAS LRNRSLVECH QGKYWLHPVI
RAEAIARLRT SDEWEITNHK VAEFWTASVS RITIFQDALQ ALEAYYHYIE INEFESAGKV
ILKSRNNQWQ QFLPLGSTLY RMGLIQPIMT AINQVVKNIG HDQDLSELYN ILGDLYWITG
DIIQAIACQE KTIDLTTQAL KSLVPQPGNK HKVYYLRMLE VDSLLSIGLY KIDLWELEEA
AKLFQQVIYL AQNTDHHRWA EKASVCLALV NSYLGLYDAA YLLADVAYQN IKNEEILETG
RFAYFMQILG QTYVNLGEFT KAKEMFHQAL TFAEESHYMQ VKAKTLNGLA EIHRQQADYP
LALAYHTEAI ELLEKIGAKC DLAETYFQLG LTYQKMAKSD ASQKYFAQAT HLFTEIKAPN
QVAKISITAS F
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