Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3408 |
Symbol | |
ID | 3679933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4233438 |
End bp | 4234337 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637718759 |
Product | ribonuclease BN |
Protein accession | YP_323910 |
Protein GI | 75909614 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) [TIGR00766] ribonuclease, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0329161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTAA AAGCGATTTG GCAACTTTTT CAAGAGGCGT TGCAAGAGTG GAATGATGAT AAAGCCTCAC GTTTGGCAGC TGCATTAGCT TACTATACGG TGTTTTCTAT CGCACCTTTG TTGATTATTG TCATTGCGAT CGCCGGTGCA GTATTTGGAG AAGAAGCTGC TAGGGGCGAA ATTGTGCAGC AAATTCAAGG TTTAGTAGGT AGAGATGGGG CAGAGTTTAT TGAAACTGCT ATTCAAAACG TAGATAGGCC AAAGACGGGT ACGATAGCTT CTCTTATTAG TATTGCTCTT TTATTATTGG GTGCGACTGG TGTTTTTATC GAGTTACAAG ACTCCCTCAA CACCATTTGG GAAGTACAAC CAAAACCAGG ACGCGGTGTC AAGGGTATTT TTCGCCAGCG TTTTTTATCT TTTGGCATGG TTTTAGGTAT TGGCTTCTTG CTGTTAGTTT CTCTGGTAAT TAGTACTGTA TTATCAACGC TAGTTAATTA TTTTGGTGGT TTACTACCGG GTGTAGATTT TCTTTGGCAA TTGGTTAACT TTATTATTTC TTTTGCCATC ACTACGTTGC TGTTTGCATT AATTTTCAAG GTTTTACCAG ATGTCAGAAT TACTTGGAAT GATGTTTTAG TTGGTGCAAT TCTTACCTCA ATTTTATTTT CTATCGGTAG ATTTTTATTA GGACAATATT TAGGTAATGC TGGTTTTGGT TCAGCCTATG GCGCAGCTGG TTCAGTCGTG TTGATTTTAG CTTGGGTTTA CTATACTGCC CAAATTCTCT TTTTCGGTGC TGAGTTTACC CAGGTTTATG CCAGAAAATA CGGCAGACGT ATTGTTCCAA CTCGTCACGC TATGCCTTTA AATGATACAA ATTCGGGAAA TCGGCATTAG
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Protein sequence | MNLKAIWQLF QEALQEWNDD KASRLAAALA YYTVFSIAPL LIIVIAIAGA VFGEEAARGE IVQQIQGLVG RDGAEFIETA IQNVDRPKTG TIASLISIAL LLLGATGVFI ELQDSLNTIW EVQPKPGRGV KGIFRQRFLS FGMVLGIGFL LLVSLVISTV LSTLVNYFGG LLPGVDFLWQ LVNFIISFAI TTLLFALIFK VLPDVRITWN DVLVGAILTS ILFSIGRFLL GQYLGNAGFG SAYGAAGSVV LILAWVYYTA QILFFGAEFT QVYARKYGRR IVPTRHAMPL NDTNSGNRH
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