Gene Ava_3408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3408 
Symbol 
ID3679933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4233438 
End bp4234337 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content39% 
IMG OID637718759 
Productribonuclease BN 
Protein accessionYP_323910 
Protein GI75909614 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN)
[TIGR00766] ribonuclease, putative 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0329161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTAA AAGCGATTTG GCAACTTTTT CAAGAGGCGT TGCAAGAGTG GAATGATGAT 
AAAGCCTCAC GTTTGGCAGC TGCATTAGCT TACTATACGG TGTTTTCTAT CGCACCTTTG
TTGATTATTG TCATTGCGAT CGCCGGTGCA GTATTTGGAG AAGAAGCTGC TAGGGGCGAA
ATTGTGCAGC AAATTCAAGG TTTAGTAGGT AGAGATGGGG CAGAGTTTAT TGAAACTGCT
ATTCAAAACG TAGATAGGCC AAAGACGGGT ACGATAGCTT CTCTTATTAG TATTGCTCTT
TTATTATTGG GTGCGACTGG TGTTTTTATC GAGTTACAAG ACTCCCTCAA CACCATTTGG
GAAGTACAAC CAAAACCAGG ACGCGGTGTC AAGGGTATTT TTCGCCAGCG TTTTTTATCT
TTTGGCATGG TTTTAGGTAT TGGCTTCTTG CTGTTAGTTT CTCTGGTAAT TAGTACTGTA
TTATCAACGC TAGTTAATTA TTTTGGTGGT TTACTACCGG GTGTAGATTT TCTTTGGCAA
TTGGTTAACT TTATTATTTC TTTTGCCATC ACTACGTTGC TGTTTGCATT AATTTTCAAG
GTTTTACCAG ATGTCAGAAT TACTTGGAAT GATGTTTTAG TTGGTGCAAT TCTTACCTCA
ATTTTATTTT CTATCGGTAG ATTTTTATTA GGACAATATT TAGGTAATGC TGGTTTTGGT
TCAGCCTATG GCGCAGCTGG TTCAGTCGTG TTGATTTTAG CTTGGGTTTA CTATACTGCC
CAAATTCTCT TTTTCGGTGC TGAGTTTACC CAGGTTTATG CCAGAAAATA CGGCAGACGT
ATTGTTCCAA CTCGTCACGC TATGCCTTTA AATGATACAA ATTCGGGAAA TCGGCATTAG
 
Protein sequence
MNLKAIWQLF QEALQEWNDD KASRLAAALA YYTVFSIAPL LIIVIAIAGA VFGEEAARGE 
IVQQIQGLVG RDGAEFIETA IQNVDRPKTG TIASLISIAL LLLGATGVFI ELQDSLNTIW
EVQPKPGRGV KGIFRQRFLS FGMVLGIGFL LLVSLVISTV LSTLVNYFGG LLPGVDFLWQ
LVNFIISFAI TTLLFALIFK VLPDVRITWN DVLVGAILTS ILFSIGRFLL GQYLGNAGFG
SAYGAAGSVV LILAWVYYTA QILFFGAEFT QVYARKYGRR IVPTRHAMPL NDTNSGNRH