Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3398 |
Symbol | |
ID | 3680059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4226008 |
End bp | 4227243 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637718748 |
Product | general substrate transporter |
Protein accession | YP_323900 |
Protein GI | 75909604 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0177815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAGCTT TTAATACATT TGACGCAAGC TTGCGGCTTA ACCTGCTGAT TCTATTTACG GCAGGTTTAT TGTTCTGGTC GAGTACTGCT ACTTTCTTGC CCACTCTGCC CTTATATATT GAGGATGTGG GAGGAAGCAA GCAAGAAATT GGCATTGTGA TGGGTGGTTT TGCTATTGGG TTGTTAGTAT TTCGCCCAAT GCTGGGACGA ATGGCGGATC AAAACGGTCG GAAGTTACTG TTATTAATTG GGACAATAGT GGCAACAATT GCCCCCTTTG GCTATTTGGC ATTTAAATCA ATTCCTTTAT TGATGCTGGT GCGCGTCTTT CATGGCATTA GCATTGCTGC TTTTACCACT GGTTACAGTG CTTTAATAGC AGATTTAGCC CCTATAGCCA TTCGTGGTGA AATCATCAGT TACATGAGTC TCACTGCTCC CATTGGCTTG GCAATTGGCC CGGCTTTAGG GGGTTATCTA CAAGCTTCAA TTGGTTATCC AATTTTATTT TTAATAGCAT CCGAATTGGC TTTTGTGGGG TTATTGGGAA CGATTCAAGT TTCTAATCCA CCTGTACCAC AAGGTCGCCA AGCAACAGAA AAGGATAGTA ATTTCTGGCA ACTTTTAAGT AGCCCACGGG TGAGAGTGCC AACTTTGGTG ATGTTGCTCA TTGGTATAGC TATCGGTGCT GTGCATATTT TTTTACCACT GTTTATTAAA TCAACAGGGG TGGAATTTAA CGCCGGACTA TTTTTTACGA TCGCGGCCAT TGGTAGTTTC AGTTTACGGG TATTTGCAGG GAAAGCTAGC GATCGCTTCG GTCGGGGTTT GTTTATTACT TTCGGTATCA TGGCTTATAT GTTGTCATCT TTCTTGTTAT GGCAAGCCAA CAGTGCCATT AGTTTCGCTA TTGCAGCGAT CGCTGAAGGT TGTGGCGGCG GAACAATGAT TTCGATGATT ACGACGATGA TGGCAGACCG CTCGCTACCA CAAGAGCGAG GACGAATTTT CTCTATTTGT ATCGCTGGAT TGGATTTAGG AATTGCGATC GCTGCCCCTA TTTTAGGTTT TATTGCTGAA GCGACTGGCT ATCGCAGTAT GTTTGCCTAT ACAACTGCTT TAACTTTCCT AGCCTTACTA ATTTTCCTGA CCAGATCGAG TAAAAATTTG AGCAATTCCC TGCGGTTTGC TCTGGGTCGC GGTCAAGATG TCTATTCTCT GCATAATAGT AACTAG
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Protein sequence | MKAFNTFDAS LRLNLLILFT AGLLFWSSTA TFLPTLPLYI EDVGGSKQEI GIVMGGFAIG LLVFRPMLGR MADQNGRKLL LLIGTIVATI APFGYLAFKS IPLLMLVRVF HGISIAAFTT GYSALIADLA PIAIRGEIIS YMSLTAPIGL AIGPALGGYL QASIGYPILF LIASELAFVG LLGTIQVSNP PVPQGRQATE KDSNFWQLLS SPRVRVPTLV MLLIGIAIGA VHIFLPLFIK STGVEFNAGL FFTIAAIGSF SLRVFAGKAS DRFGRGLFIT FGIMAYMLSS FLLWQANSAI SFAIAAIAEG CGGGTMISMI TTMMADRSLP QERGRIFSIC IAGLDLGIAI AAPILGFIAE ATGYRSMFAY TTALTFLALL IFLTRSSKNL SNSLRFALGR GQDVYSLHNS N
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