Gene Ava_3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3238 
Symbol 
ID3680582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4026735 
End bp4029578 
Gene Length2844 bp 
Protein Length947 aa 
Translation table11 
GC content40% 
IMG OID637718589 
Producthypothetical protein 
Protein accessionYP_323741 
Protein GI75909445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0772641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGCAC AAACAGGCAA AGGAGCAAAT GCTCCTACAA TTGACGTAGC TCAAATCTGT 
CAACAACTTA AAGCTCTTGG ATTTAATCAA AATGATGCAG TCTGTCTCCG CGCTTTTTAT
CCTAGCAACG ATCCACGAAA AACCAATGAT AAGGGGAGAA AGGCAGAAAC TAATAATTTA
GATGAACTAG TCGAAATTGT TAGGCAATTT CAATCAGAGG GTAGAGGGGT TTACTTGGTT
GTGAATGGCC CTGGACATAG AGATCAAGAT ATCACTAACT GTCGCGCACT TTTTATTGAA
CATGACGATT TAGATAAAGA AGTACAGAGA GAATTATGGC GATCGCTCAA ACTGCCAGAA
CCAAGTTTGC AGATAGATAC TGGCGGTAGG TCTATACATA GTTATTGGGT TTTTGACCAG
TTCATCAATC CTCAGCAGTG GAAACGCCTG CAAGCTGACT TACTGGAGTA TGCAGATGCA
GATCGCGCAC TCAAAAATCC ATCGAGGGTG ATGAGGCTGG CCGGGTGTTT GCACTTTTCA
CTCAATAACC AAAGCAACGG ACAAACAACA ATTATTTCTA ACTCAGGCAA GCTTTATTCT
TTTGAAGAAT TAAGAAAATC AATACCTTGT TACAAACCAC AATCACAAGA AAATGCCCCT
GTGGCTGATG ATTGGGCTGA TATGCGAAAG CTTTCTCCAT ATCTAGATGG ATATCAAACA
GGGGGGCGCA AAGGATGGAT AACCTGTAAG TGTCCTGCTC ATGATGGTGA CAGTCATGAT
AGTTTACACG TTAACGAAGC TACAGGAAAA TTTCGCTGTC ATGGTGGGTG CAATACTAAA
GATGTTTTTA GAGCTGCTCT AGACATCGCT AAATCAAAAG GCCATATCGC TCCAGAAAAA
CACCAACAGG CGATCGCCCA ACCATCAAAA GTTCTTATTC ACACTACAGC CACCATTCCA
TACGACGATA TTAAAGCTGA GTACATCAAT TTGCTAGATT CTCAGGTTTC AAAATCAGAA
ATAAGTCGTT TTAAAACTGA GGCAAACAAA AAGTATTATC CTGTAAAGTT AGACAATTTT
CTAGGCAATG TAGAAGCAGA ACATCGTAAG TCTGAAGATA ATGAACTGAT AAGAGAAGAC
ATTCAAACAA TATTAAGATG TTCCAAGATT AATTTAGATG TTAGGCAGTT CTTACCAAGA
ACAATAGCGA CAGCCTTAAT GTTATTTGGG CGCAACCAAT CGCTACCAGA GACCTCATTA
ATGATGTGTT TAATCAGCGT AGTTAGCTCA TCTCACATGG TTGGTACAAA GGTTTTGATC
GGAAATAGGC ACAATGAATT TTATCAAAAT CCAGCTATTA ACCATGCTTT AGTTGGTGAG
TCTGGAACTG GTAAGTCAAT CATCTTTAGA GCTTTGGTTA AAAAGCCCCT AAATGCTCTA
AGAGAGGAAG AAGTTAAACG ATTTAAAGAA GAATCAGAAG AATACAACAG AGATTTAGCT
GCATGGGAAA AATCTGATAA ATCCACTCCA CAACCAGAAG CACCAAAGCC AGTAAACAAG
ATGTATTTAA CTGGCTCCAC ATTGGAAGGA TTGAAAGATT ACATTGCAAA AGCACCAGAA
TACTCAATAC TGAATGTTGT TGATGAATTA TCAGGTTTGT TTGGTGGATT CAATCAATAC
AAGCGTGGTC AAGGTAATGA CCGCCAAGAA TTTCTCAGTT TGTATGATGG TGATGGATTC
AGTGAAGCTA AAGTATCAAA GAACATTTGT GTTGGGGCAA ATAACACAGC TTGGCTTGGT
GGATTACAAC CCTCCATTCT TCATCAATAT TTTCAGATTG GCGCAAGTGA TGGATTACTA
CCCAGATTTA CTTTTTCAAT ACTGAATGAA GATATACGTC TACTACCAGA TGAGAGCGCA
CCGGTTATTG ACTTAACTGG ACTGCTTCAA GGACTGTACA GGGCAACACT TAACTGTGCG
CCTCAGACGT ACCATATTAC AGATGAGGCT TACCAATATT TCCGTAGTGT GGACAATAAA
TGGCAACTTG AAGCCGGAAG GCTTCCAAAC GGTGCTTTGA AAGAGTTCTT GAAAAAGTGT
ACAGGGTTGT TGGGACGGGT ATCCTTAAAT CTCCATCTCA TCCATGAACT ATCAGATTCT
TTTTGTGAAA CTCCACCAGC AATCATTCCC TTAATTCGAG TACAACAGGC TGCGGGCATC
GTTGAGCATC TATTAACACA GATTCAGACA GTGCATCTAC AAATAGCTGG GGAATCAACA
CAGTCTGCAA TTTTAGCCAT GATTAAGCTT TCTATAAAAC GCCAATCACT TGGTGAGGAA
GGATGGCTCA CTGCAAGAGA TGTCAGCCTC AGCCAAAACG CTAAAGGCCG GATGAAATCA
GCCGAGGTTA GAGAACTGAT GACTAAGGCA GTAGATATGG GTTACGGGGA ATTAAGAGGA
ACTGGTAAAC GATTAGAGTT TAGAACTAAT AAAGTTGTAG ACGATTTGTT GGCTACTGAT
AAAAAAGCCT CAACCACTGT AAAAACAAGA AGTTCAGAAG AAAATAGTCA AAACTCTGTA
GATGATTGTA GACGATTTGT AGATAATTAT TTCTCTCCTG AAACCATCGT GAAAACTGAA
TTACAGAAAA AACAGTCTGA TTTTGTAGAC GATGTAGACA ATTTTTCTCA TGAGGTGAAG
GTCAAAACAT TGGTTGAGCC ACAAACAGAT ACTCCAGTTG TGAACTTGGA TGAAAATTTA
CATAGAGAAT CGTCTACAAC ATCTACAAAT CAAGATCGTT ATTCCGAAAG TATTGGTAGA
AATAGCTTTG AGCCTGTTTC TTAA
 
Protein sequence
MYAQTGKGAN APTIDVAQIC QQLKALGFNQ NDAVCLRAFY PSNDPRKTND KGRKAETNNL 
DELVEIVRQF QSEGRGVYLV VNGPGHRDQD ITNCRALFIE HDDLDKEVQR ELWRSLKLPE
PSLQIDTGGR SIHSYWVFDQ FINPQQWKRL QADLLEYADA DRALKNPSRV MRLAGCLHFS
LNNQSNGQTT IISNSGKLYS FEELRKSIPC YKPQSQENAP VADDWADMRK LSPYLDGYQT
GGRKGWITCK CPAHDGDSHD SLHVNEATGK FRCHGGCNTK DVFRAALDIA KSKGHIAPEK
HQQAIAQPSK VLIHTTATIP YDDIKAEYIN LLDSQVSKSE ISRFKTEANK KYYPVKLDNF
LGNVEAEHRK SEDNELIRED IQTILRCSKI NLDVRQFLPR TIATALMLFG RNQSLPETSL
MMCLISVVSS SHMVGTKVLI GNRHNEFYQN PAINHALVGE SGTGKSIIFR ALVKKPLNAL
REEEVKRFKE ESEEYNRDLA AWEKSDKSTP QPEAPKPVNK MYLTGSTLEG LKDYIAKAPE
YSILNVVDEL SGLFGGFNQY KRGQGNDRQE FLSLYDGDGF SEAKVSKNIC VGANNTAWLG
GLQPSILHQY FQIGASDGLL PRFTFSILNE DIRLLPDESA PVIDLTGLLQ GLYRATLNCA
PQTYHITDEA YQYFRSVDNK WQLEAGRLPN GALKEFLKKC TGLLGRVSLN LHLIHELSDS
FCETPPAIIP LIRVQQAAGI VEHLLTQIQT VHLQIAGEST QSAILAMIKL SIKRQSLGEE
GWLTARDVSL SQNAKGRMKS AEVRELMTKA VDMGYGELRG TGKRLEFRTN KVVDDLLATD
KKASTTVKTR SSEENSQNSV DDCRRFVDNY FSPETIVKTE LQKKQSDFVD DVDNFSHEVK
VKTLVEPQTD TPVVNLDENL HRESSTTSTN QDRYSESIGR NSFEPVS