Gene Ava_3124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3124 
Symbol 
ID3680792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3879698 
End bp3881488 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content45% 
IMG OID637718468 
ProductCl- channel, voltage gated 
Protein accessionYP_323627 
Protein GI75909331 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGTTTT TAGCCGTACT CATCGGCGGT GGCACCGGTA TGGGGGTGGT AACTTTTCAC 
TATTTGATTG AGCTGATTCA CCACCTGATG CTAGAAAATC TGATGGGTGC AATAGGTGTT
TGGGGCGCTT GGACATTAGC TCTTGTCCCC ATTTTAGGAG GGCTAATAGT TGGATTAATG
CGCTGGCGCA CACAAGACTT TGGCCCTGGA TTGTCCTCAC TCATTGCCGC TTCTGAGGGT
AGCGAAATCA AAGGACAATT GCGTCCTGTC ACGAAAATGT TAGCGGCTGC CGTTTCCTTG
GGGAGTGGTG CTTCTTTGGG CCCAGAGGGC CCAAGTGTGG AAATTGGCGC TAATTTCGGA
ATGCTGTTGT CCTTAATATT ACAAGTCTCA CAAGAACGTC AGCGTTTACT TTTAGGTGCT
GGTGCGGCAG CTGGCTTGGC AGCCGGATTT AATGCGCCAA TTGCTGGGGT ATTTTTTGCC
TTAGAAGTAG TCATGGGGGC TACATCTTTT GCCACTTCCG CCGTGAGTGT AGTGCTGTTG
GCGGCGGTCG TAGCAGCTTT AATTGCACAA ATTGGTTTAG GGGCGCAACC TGCCTTTGCT
TTACCAGTTT ACCAAGTCCG TAGCCCTTTG GAACTGCCTC TTTATCTGGG GTTGGGGTTG
GGTGCTAGTT TGGTTTCTGT AGCTTATAAA CAATCTATTA ATTGGGGAAA AGCTTGTTTT
GTCGGTTCGA TTCCTGGGTT TCAATTTTTA GGTAAAATTC CTCAGCCAAT TCACCCTATC
ATTGGGGGTT TCATGATCGG CATAGTAGCT TTAAAGTTCC CGCAAATTTT GGGCATCGGT
TATGGCACAG TACAAGCGAT GCTGCAAGAT GTCAAATTTT CTCTGGATTT GTTATTGATA
TTATTGGTTT TAAAGTTGCT GATGACAGCC ATTAGTGCGG GTAGTGGTTT TGTTGGCGGT
TTGTTTGCGC CGGCGATGTT TTTAGGTGCT TCATTGGGTT CAGCTTATGC TAAGGTTCTC
ACCCTTATAG CGCCAGGAAT TGGCGAATAT ATGGCAGCAC CTCCGGCTTA CGCAATGGTG
GGTATGGCTG CTGTTTTAGC TGGAAGTGTG AGAGCACCAT TAACCTCAAT TTTAATGTTA
TTTGAACTTA CCCGTGATTA CCGAATTGTT TTACCTTTAA TGGCGGCTGT GGGCTTAAGT
GTATGGCTAG TAGAAAGGAT TAAACCCAAT ACTAATTCTC ATACTAATTT ACAGCAAATT
GGTCTTTCAA TTCCGAAAGA CCAAAAAGTA GAAATTTTGC AGCAAATTTT AGTAGAGGAT
GCTATGCTTG CTTGCCCAAA AAAGCTACCT GCAACTTTGG GCATTTTAGA AGCTGCTAGG
GAAATGATCA GCGATCGCAC ACGCAGCGCT CTAGTTATTG ATGACGCAGA ACAACTAGTT
GGGATTATCT CCCTAGAAGA CCTCAACCGT ACCCTTTCTC TATGGCAAAA TTACCCGAAT
TCTGCAAGTG AAATCCAAAG TAATTTAACC AATCAAAGCA TCATCGATAT CTGTACAAAA
GAGATCCTCT ATGCTTGGCG TGATGAACCT TTGTCTGAGG CTTTAGACCG CATGGAGGTT
AGAGGTTTAC ATCAGTTACC TGTGGTAGCA CGAGATAACC ATGACCATAT TCTAGGGTTG
CTAGATAAGG AGCAAATCGC ATTAACGTGT AACTTGGCAG TCACACGCCA GACACTTTAC
CGTTTGGTTA GTAGTCACCA GTCATTGGTC AGTGAAAAAA TCAACAACTG A
 
Protein sequence
MLFLAVLIGG GTGMGVVTFH YLIELIHHLM LENLMGAIGV WGAWTLALVP ILGGLIVGLM 
RWRTQDFGPG LSSLIAASEG SEIKGQLRPV TKMLAAAVSL GSGASLGPEG PSVEIGANFG
MLLSLILQVS QERQRLLLGA GAAAGLAAGF NAPIAGVFFA LEVVMGATSF ATSAVSVVLL
AAVVAALIAQ IGLGAQPAFA LPVYQVRSPL ELPLYLGLGL GASLVSVAYK QSINWGKACF
VGSIPGFQFL GKIPQPIHPI IGGFMIGIVA LKFPQILGIG YGTVQAMLQD VKFSLDLLLI
LLVLKLLMTA ISAGSGFVGG LFAPAMFLGA SLGSAYAKVL TLIAPGIGEY MAAPPAYAMV
GMAAVLAGSV RAPLTSILML FELTRDYRIV LPLMAAVGLS VWLVERIKPN TNSHTNLQQI
GLSIPKDQKV EILQQILVED AMLACPKKLP ATLGILEAAR EMISDRTRSA LVIDDAEQLV
GIISLEDLNR TLSLWQNYPN SASEIQSNLT NQSIIDICTK EILYAWRDEP LSEALDRMEV
RGLHQLPVVA RDNHDHILGL LDKEQIALTC NLAVTRQTLY RLVSSHQSLV SEKINN