Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3124 |
Symbol | |
ID | 3680792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3879698 |
End bp | 3881488 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637718468 |
Product | Cl- channel, voltage gated |
Protein accession | YP_323627 |
Protein GI | 75909331 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTGTTTT TAGCCGTACT CATCGGCGGT GGCACCGGTA TGGGGGTGGT AACTTTTCAC TATTTGATTG AGCTGATTCA CCACCTGATG CTAGAAAATC TGATGGGTGC AATAGGTGTT TGGGGCGCTT GGACATTAGC TCTTGTCCCC ATTTTAGGAG GGCTAATAGT TGGATTAATG CGCTGGCGCA CACAAGACTT TGGCCCTGGA TTGTCCTCAC TCATTGCCGC TTCTGAGGGT AGCGAAATCA AAGGACAATT GCGTCCTGTC ACGAAAATGT TAGCGGCTGC CGTTTCCTTG GGGAGTGGTG CTTCTTTGGG CCCAGAGGGC CCAAGTGTGG AAATTGGCGC TAATTTCGGA ATGCTGTTGT CCTTAATATT ACAAGTCTCA CAAGAACGTC AGCGTTTACT TTTAGGTGCT GGTGCGGCAG CTGGCTTGGC AGCCGGATTT AATGCGCCAA TTGCTGGGGT ATTTTTTGCC TTAGAAGTAG TCATGGGGGC TACATCTTTT GCCACTTCCG CCGTGAGTGT AGTGCTGTTG GCGGCGGTCG TAGCAGCTTT AATTGCACAA ATTGGTTTAG GGGCGCAACC TGCCTTTGCT TTACCAGTTT ACCAAGTCCG TAGCCCTTTG GAACTGCCTC TTTATCTGGG GTTGGGGTTG GGTGCTAGTT TGGTTTCTGT AGCTTATAAA CAATCTATTA ATTGGGGAAA AGCTTGTTTT GTCGGTTCGA TTCCTGGGTT TCAATTTTTA GGTAAAATTC CTCAGCCAAT TCACCCTATC ATTGGGGGTT TCATGATCGG CATAGTAGCT TTAAAGTTCC CGCAAATTTT GGGCATCGGT TATGGCACAG TACAAGCGAT GCTGCAAGAT GTCAAATTTT CTCTGGATTT GTTATTGATA TTATTGGTTT TAAAGTTGCT GATGACAGCC ATTAGTGCGG GTAGTGGTTT TGTTGGCGGT TTGTTTGCGC CGGCGATGTT TTTAGGTGCT TCATTGGGTT CAGCTTATGC TAAGGTTCTC ACCCTTATAG CGCCAGGAAT TGGCGAATAT ATGGCAGCAC CTCCGGCTTA CGCAATGGTG GGTATGGCTG CTGTTTTAGC TGGAAGTGTG AGAGCACCAT TAACCTCAAT TTTAATGTTA TTTGAACTTA CCCGTGATTA CCGAATTGTT TTACCTTTAA TGGCGGCTGT GGGCTTAAGT GTATGGCTAG TAGAAAGGAT TAAACCCAAT ACTAATTCTC ATACTAATTT ACAGCAAATT GGTCTTTCAA TTCCGAAAGA CCAAAAAGTA GAAATTTTGC AGCAAATTTT AGTAGAGGAT GCTATGCTTG CTTGCCCAAA AAAGCTACCT GCAACTTTGG GCATTTTAGA AGCTGCTAGG GAAATGATCA GCGATCGCAC ACGCAGCGCT CTAGTTATTG ATGACGCAGA ACAACTAGTT GGGATTATCT CCCTAGAAGA CCTCAACCGT ACCCTTTCTC TATGGCAAAA TTACCCGAAT TCTGCAAGTG AAATCCAAAG TAATTTAACC AATCAAAGCA TCATCGATAT CTGTACAAAA GAGATCCTCT ATGCTTGGCG TGATGAACCT TTGTCTGAGG CTTTAGACCG CATGGAGGTT AGAGGTTTAC ATCAGTTACC TGTGGTAGCA CGAGATAACC ATGACCATAT TCTAGGGTTG CTAGATAAGG AGCAAATCGC ATTAACGTGT AACTTGGCAG TCACACGCCA GACACTTTAC CGTTTGGTTA GTAGTCACCA GTCATTGGTC AGTGAAAAAA TCAACAACTG A
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Protein sequence | MLFLAVLIGG GTGMGVVTFH YLIELIHHLM LENLMGAIGV WGAWTLALVP ILGGLIVGLM RWRTQDFGPG LSSLIAASEG SEIKGQLRPV TKMLAAAVSL GSGASLGPEG PSVEIGANFG MLLSLILQVS QERQRLLLGA GAAAGLAAGF NAPIAGVFFA LEVVMGATSF ATSAVSVVLL AAVVAALIAQ IGLGAQPAFA LPVYQVRSPL ELPLYLGLGL GASLVSVAYK QSINWGKACF VGSIPGFQFL GKIPQPIHPI IGGFMIGIVA LKFPQILGIG YGTVQAMLQD VKFSLDLLLI LLVLKLLMTA ISAGSGFVGG LFAPAMFLGA SLGSAYAKVL TLIAPGIGEY MAAPPAYAMV GMAAVLAGSV RAPLTSILML FELTRDYRIV LPLMAAVGLS VWLVERIKPN TNSHTNLQQI GLSIPKDQKV EILQQILVED AMLACPKKLP ATLGILEAAR EMISDRTRSA LVIDDAEQLV GIISLEDLNR TLSLWQNYPN SASEIQSNLT NQSIIDICTK EILYAWRDEP LSEALDRMEV RGLHQLPVVA RDNHDHILGL LDKEQIALTC NLAVTRQTLY RLVSSHQSLV SEKINN
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