| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2808 |
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| Symbol | |
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| ID | 3681644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 3468497 |
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| End bp | 3471148 |
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| Gene Length | 2652 bp |
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| Protein Length | 883 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637718154 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_323316 |
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| Protein GI | 75909020 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0914392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.245716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTAATA AACTTTTTAA ATCATTATTT AACCCTTGGT TAGTAACGCT ATTTACTGCC
AGTTTCATAC TTTGTCTATT TTTTGGCAGT TTTCACCGAG CAGCTATAGT CAAGGCTCAA
ACTCCTGATG CTTATAAACT TGTTAATCAG GGTATTCAAA GCTATAAAAA AGGAGACTTT
TATGCTGCCA TTCAACACTG GGAAACAGCT TTAGATTTTT ATCAAAAAAA TAACGATACT
CCTAATATAG CCATCATTAA TGAAAATTTA GCTAGAACTT ATCAACAGTT AGGTAATAAA
AGCTTAACTT TGAGTTATTG GGAAAAGGTA AAAGCTTATT ATCACTCTCA AAAAGATTTG
CCAAAAGTCG GAAGAATCCT GACTGAAATA GCACAAATTT ATAGTAATTC AGGACAAACA
AAAAAAGCCA TCAGTCTTTT ATGTGGTGCA GATACATTAA TTTGTCAAAC AGGGAGTGCA
TTACAAATTG CCCAGGAACA ACAAGATAAA TTAGGAGAGG TTGCAGCCTT GGGAAGCTTA
GGAGAAGCTC ACCGACTGCA AGGTAACTAT GATTTATCAA TTAAATATCT AGAGACTGTC
AACAATAGCC AAAATCAAAC AGACAATTTT GCTATCCTTA ACAGTTTAGC TAATGCTTAC
GCTGGCCGCG CCCAACTTTG GAATTTACGC GCTAAATCTG CTAAAAATCA TAACTCTTCT
AAAATGAATG AGTTTATACA ACGTTCTCAA GATGATTATA GAATAGCCAT AATTTCTTTG
CAAAAAAGTA TTGCCGTAGC AGCTAAAGAA AATAATAAAA TTGCCGAACT ACGCAGTCAT
ATAAACTTCA TCAAGCTTGC TTATCAAACT GTAGATAGTA ATATCTTAAA TCCCAATCAA
ATTGAGACAA ATATCCAACA GGCTTTAGCT TTAATTGAGC AAACACCAGA TTCAATTAAC
AAAGTATATG CAGAAATTGA ATTAGCTAAT TTACCTATTA CTAATGATGA ATTCACTTCA
TCCGTCAATC AATGCCACCA AAAAACAAGA TTGCCAGAAT TACAAGTTAA GCAGCTTTTT
CATCAAGCCA TTCAAACTGC CAAAAAATTG CAAGATGCCC GTTCTACATC ATATGCTTTA
GGAGAATTAG GACATTTATA TGAATGCCAA AAAGAGTATA AATCTGCTTG GGAATTAACT
AACCAGGCTA TTTGGTTCGC TGACCAAAAT TTACAAGCAA AAGATAGTTT ATATTTATGG
GAGTGGCAAG CAGGAAGAAT TCTAGCAGCA CAGAAACAAC TTAATCAAGC ACTATCTTTT
TATGAAAGAG CTTATAAAAC ATTAGAAGAA CTACGCAATG ATATTTTAAC TACAAACCGT
GATTTCCAAT TTGATTTCCG CGATGTTGTG GAGCCTGTCT ACCGCCAATT GGCACAACTT
CAGTTAGAAT TGGCTACATC TAATAATCAA GATAGTGTAA GGCACAATCA ACAACTAAAT
AGTGCATTGA CCACTATCAA CTCCCTCCGA CAAGCAGAAA TCCAAAATTA TTTTGGTAAT
GATTGTATCC TAGCAGCTTT CAACAACCAG CCACTGTATC AAGTCATAGA AAAAGATACT
GCTGTTATCA GTTCAATTAT TTTTAAAGAT AAAATAGGAA TTTTACTCAG TCTACCCAAT
CAACAAGAAT ACTTACACTG GGTAGAGAAT AAAAATCAAG AAACCTTGCG TCAAGAAATA
TCTCAATTCC GTAATAGTTT ACTAGCACAA CAAACTATCA ATTACAGTAC CAAAGATGCC
GAAAATATTT ACGATGCAAT CATTATTCCA ATTGAAAAAT ATTTAACAGA ACAGAAAATT
AAAACTTTAG TTTTTATTCA AGATGGTTTC TTGCGTGATG TCCCAATGGC TGCGCTTTAC
GACAAAAATG AAAGCAAATA TTTAATTGAA AAATATGCTG TTGCTACAAC TTCTAGTTTA
CAATTAACCG ACTTAAAACC TTTAAGCTCA CAAGTCAATC GTGCTTTAGT TTTAGCGTTG
AGTCAAGAAA GTAAAATAGA TAATAAGGTT TTTCCTGAAC TCGCATATTT CCCTATAGAA
TATGGGGCTA TTAAAAAAAT ATTTCCCGAA AGTAAAAAAC TAGAAAATGA AGAGTTTGCT
ATCCAAAACT TAAAAAGAGA AATTCAAGAA AAAACTTATC CCATTATTCA TATTGCGACT
CATGCACAGT TTGGTATTAT CCCAGAAGAT ACGTTTCTAG TAATAGGTAA TAATGAAAAA
CTTACCATTG ATAAACTAGA AGCTATACTG CGCCAATCTG GTAATATTTC TAATGCAGTG
GAACTATTAA CATTAACGGC TTGTGAAACA GCTACAGGTG ACGATCGCGC TACACTAGGT
TTAGCTGGTG TAGCATTGCA AGCTGGGACA AAAAGCGCCT TAGCTTCACT ATGGCCTGTA
GACGATGATT CTACAGCCAA CTTAATTGCC GAGTTTTACG ATAAGTTACG TAATTCAGGA
ATGAGTAAAG CACAAGCTTT ACAAGCAGCA CAGTTAAAAC TAATCAGTGC CAAACAAATA
CCAGAAATTA ATGACAAATA TGACCATCCA TACTATTGGT CAGCATTTAT CCTCATAGGA
AATTGGCTTT GA
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| Protein sequence | MFNKLFKSLF NPWLVTLFTA SFILCLFFGS FHRAAIVKAQ TPDAYKLVNQ GIQSYKKGDF
YAAIQHWETA LDFYQKNNDT PNIAIINENL ARTYQQLGNK SLTLSYWEKV KAYYHSQKDL
PKVGRILTEI AQIYSNSGQT KKAISLLCGA DTLICQTGSA LQIAQEQQDK LGEVAALGSL
GEAHRLQGNY DLSIKYLETV NNSQNQTDNF AILNSLANAY AGRAQLWNLR AKSAKNHNSS
KMNEFIQRSQ DDYRIAIISL QKSIAVAAKE NNKIAELRSH INFIKLAYQT VDSNILNPNQ
IETNIQQALA LIEQTPDSIN KVYAEIELAN LPITNDEFTS SVNQCHQKTR LPELQVKQLF
HQAIQTAKKL QDARSTSYAL GELGHLYECQ KEYKSAWELT NQAIWFADQN LQAKDSLYLW
EWQAGRILAA QKQLNQALSF YERAYKTLEE LRNDILTTNR DFQFDFRDVV EPVYRQLAQL
QLELATSNNQ DSVRHNQQLN SALTTINSLR QAEIQNYFGN DCILAAFNNQ PLYQVIEKDT
AVISSIIFKD KIGILLSLPN QQEYLHWVEN KNQETLRQEI SQFRNSLLAQ QTINYSTKDA
ENIYDAIIIP IEKYLTEQKI KTLVFIQDGF LRDVPMAALY DKNESKYLIE KYAVATTSSL
QLTDLKPLSS QVNRALVLAL SQESKIDNKV FPELAYFPIE YGAIKKIFPE SKKLENEEFA
IQNLKREIQE KTYPIIHIAT HAQFGIIPED TFLVIGNNEK LTIDKLEAIL RQSGNISNAV
ELLTLTACET ATGDDRATLG LAGVALQAGT KSALASLWPV DDDSTANLIA EFYDKLRNSG
MSKAQALQAA QLKLISAKQI PEINDKYDHP YYWSAFILIG NWL
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