| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2168 |
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| Symbol | |
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| ID | 3679881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 2681952 |
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| End bp | 2683370 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637717511 |
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| Product | retinal pigment epithelial membrane protein |
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| Protein accession | YP_322683 |
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| Protein GI | 75908387 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.123356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATAA TTGATAAAAA ATCAAGTAAG AAAGCCTGGG CAAGTGCATT AACTGAACCA
GCCAAAGAAT TTCCCCTGAC TCAGTTGTCC ATTATCTCTG GTAACATCCC TGAAGGATTG
CGGGGTACAC TCTACCGCAA CGGCCCTGCC AGGTTAGAAC GTGGCAGGAT GCTTGCAGGA
CACTGGTTTG ACGGTGATGG GGCAATTTTG GCTGTCAACT TTACCGATGG CGGTGTGAAT
GCAGTTTACC GCTATGTACA GACTATTGGC TATCAAGCAG AAAACGCCGC CGATAAATTT
TTGTATGGCA ATTATGGCAT GACTGCACCA GGCCCCGTTT GGAATCAATG GCGCAGACCA
GTTAAAAATG CTGCCAATAC CTCAGTCTTA GCATTACCAG ATAAACTTTT GGCATTGTGG
GAAGGTGGAA AACCTTACGC CTTAGATTTA CAGACTTTAG AAACCTGGGG CGAAGATAAT
TTAGGTGGTT TAAGTAATGG ATTAACTTAT TCTGCCCATT ATAAGCAAGA CCCCCAGACC
AAGGAAATTT TTAATTTTGG TATTAGCTTG GGGCTAAATG CCAAGTTGAA TGTTTACAAA
AGTGACTCTA CAGGTCAAAT TATCCAAAAA GCTGCATACC CCTTAGATGG TCTACCACTG
ATACATGATT TTGTTTTAGC AGGACAATAT TTAATATTTT TCATTTCCCC TGTGCGGCTG
GGTATGTTGC CTATATTGTT GGGGACTAGC AACTATAGTG ATTCTATGCA GTGGCGACCA
GAATTAGGGA CTCAGATTTT GGTTATTGAC CGCGACAGTT TATCTTTAGT CAGTCGAGGC
GAAGCAGAAC CTTGGTATCA GTGGCATTTT GCTAACGGTT ATGTAGATGC TAGTGGTGCA
GTCATTGTGG ATATTGCCCG TTACGAAGAT TTCCAAACTA ATCAATATCT CAAAGAAGTC
GCTACTGGTA AAACTCACAC ACCTGCTCAA AGTACACTGT CACGGGTCAC TTTACATCCC
CAATCTGGCA AAGTAGCCGC AATTGAACAA CTGTTAGATA GACATTGTGA ATTTCCTAAT
GTTCCACGGC AAAATGTCGG TCAAGAGTCT CGATATACCT ATATGTCAGG ATTCCGCCAA
GGCACAGATA TCAGCCAAGA ACTATTAAAC ACCATCGCCT GCTTTGACCA CAAGACACAA
ACCCTCACCG AAGCCTACCC AGGAGAAAAC TGCTATCCGT CGGAACCCAT CCTTGCGGAA
AATTGGGTCT TAACAGTGGT ATATGACGGC AATTCTCATG GTAGTCAAGT TTGGATATAT
GATAGCGAGC GCCTCAATGA AGAACCAATC TGCAAACTAA AATTACCCAG TATCATCCCT
CATAGTTTTC ACGGTACTTG GAAATCACAG AAGAGATAA
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| Protein sequence | MQIIDKKSSK KAWASALTEP AKEFPLTQLS IISGNIPEGL RGTLYRNGPA RLERGRMLAG
HWFDGDGAIL AVNFTDGGVN AVYRYVQTIG YQAENAADKF LYGNYGMTAP GPVWNQWRRP
VKNAANTSVL ALPDKLLALW EGGKPYALDL QTLETWGEDN LGGLSNGLTY SAHYKQDPQT
KEIFNFGISL GLNAKLNVYK SDSTGQIIQK AAYPLDGLPL IHDFVLAGQY LIFFISPVRL
GMLPILLGTS NYSDSMQWRP ELGTQILVID RDSLSLVSRG EAEPWYQWHF ANGYVDASGA
VIVDIARYED FQTNQYLKEV ATGKTHTPAQ STLSRVTLHP QSGKVAAIEQ LLDRHCEFPN
VPRQNVGQES RYTYMSGFRQ GTDISQELLN TIACFDHKTQ TLTEAYPGEN CYPSEPILAE
NWVLTVVYDG NSHGSQVWIY DSERLNEEPI CKLKLPSIIP HSFHGTWKSQ KR
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