| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1672 |
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| Symbol | |
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| ID | 3682228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2096227 |
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| End bp | 2098788 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637717012 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_322190 |
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| Protein GI | 75907894 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0105669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTGTG GGGCAGCCTT GAAACTAAAT CAGTATATCT ATCTAGGTAT AGCAAGTACG
ATTTGCTTGC TGATAACCCA GAAAGCAAAT GCACAAGAGA AGCCGATAAA CACAAAGGAT
ATTGGATTAA TTACAAATAT TCCTCAACTC AGTGATATTC AGCGTCCAGC AACGAGTGTT
AAAGATTGGC TAGCACAGTC AGCACCAACC CCTCCACAAA TCAAGATTAC TGGTGTGCGA
ATCAATCGTA CAGACGATAA TTTCGAGCTA ATTCTCGAAA CTCCAGATGG AGAAATATCT
GCACCAGAAA CTCTTCAAGA AGGCAATATA TTTATTGCAG ATATCCCCAA TGCAATACTA
GCTTTACCAG AAGGAAAGGT ATTTCGGGAA GACACACCAG TTGATGGTAT TTCTTATGTG
ACGGTAACAC AGGAGGAATC TAACAACACG GTGCGTGTAA CGATCTCATC CCCAGGAAAT
CTACCACCAA TCCAGGTGGT GAATCAATCC AATAATTTAA CGATCGCCCT TACTCCTACT
CCTACTTCCC CAGACATTGA ATTGATAGTA ACCGCCCAAA AACGCCCCGA AGACGCGCAA
GATGTCCCCC TTAGCTTGAC GGTAATTCCT CAACAAGAAA TCGAAGACGC TCAAATTCGT
TCTTTCCAAG ATATCGCCAA CAACACACCC AACTTTAGTT TTCTCCCCAC CACTGCGGGG
AGTGCTGATT TTAGTTACTA CAGTGTGCGG GGGTTAAATA ACTTTAACTT TTTAGCCAAT
CAAGACACCG TTGGCTTTTA CATTGATGAT GTTCCCTTCG ATTATGGCGG CTTTTTAGAT
GTTGGTTTGA TTGATTTAGA ACGGGTAGAA GTTTTGCGAG GCCCCCAAAG CACCCTCTAT
GGTAGAAGTA GTCCGGCTGG GGTGGTGAAT GTAATTTCTC GCCCACCAAG TAATCAGCCA
GAGATGCGAA TTAGCGCCCT TTACGGTAGC TACAACAACC GGGAATTGCA ATTATCCCTC
AGTGATGCCA TTATTCCCGA TAAACTGGCA TTTCGACTAG CAGGCGCATA CAACGCACGA
GATGGCGTAT TTGACAATAT CTTTCTGAAT AAGCCAATCG GAGAGCGATC GCAACTCACA
GGACGCGCTC AAATTCTCTG GACACCCACA CCAGAGTGGA ATATATCGTT TAACGCCTAT
GCCAGTGACA ACGATAATGG CAATCCTACC TTTTCTCGAC AAAACGCACA AAACCCTTTT
CAAGTTTCCC AAGAAGTTGA TGGTTTCAAT CGCCTCAGCA CTAATACCCA GGCACTAAAA
ATTAGTTACA ACGGCAATGG ATTTCGGGCT ACGTCTATTA CCAGCAGGCG ATTTAGCAAT
CAAAATACCT TGGTGGGTGA CAATTTCCCC GGTGATTTGC TACAGCAAAT TATTGGTATC
AATTCGACCC TGTGGTCACA GGAATTTCGC CTCCAATCCC CTGAAAGTGC CGACCGTTTG
CGGTGGTTGC TTGGTGGATA TTACGAGTCA CGGAATTTTA ATGTTCTAGA TGACACCTTT
AAATATACTG ATGCTGGTGC AGTAGCCTTT GGCGTACCAG CCCCAGGAAG CGATCGCGTT
TCCGCAGAAC AAAATCGTCA AACCTACGCC ATATTTGGAC AAATTGACTA CAAACCAATT
GCACCACTAA CTTTGTTTGC AGGTTGGCGC TATGAAACTG CTGACGCTGA ACTCGACCGT
CGCCGTGTTT TTGTCAATCC TGATGGTACA GTCAATCCAC CCACCGCAGA AGTACGCAAT
GCTACCCTTA ATAGTGACGC ATTTATCCCC CGCTTTGGCT TACAGTATCG CTTCAATCCC
AATTTAATGG CTTACGCCAC AATAGCTAAA GGCTACAGAC CAAGTGGATT TAACTACCGT
GCAGATACAG AAGATACACG CCGATTTCAA GAAGAAACCA CCTGGACTTA CGAAGTAGGC
TTAAAATCTT CTTGGTTAGA TGACCGACTG AGTGCAAATC TATCTATTTT TCAAAGCGAT
GTTGATAACT ACCAAGTGCT GCTGACCGAT GATTTTGGCT TTTTTAGAAA CGTTACCAAT
GCAAATGTCA AAGTCACAGG TTTAGAATTT GAACTCAAAG CCAAGCCTTT ACAAGGACTA
GATTTAATTG CTGGTATTGG CTACGTGGAC AGCAAATTTA AAAACTATAG AAATCCTTTC
ACAAATGGAG ACTTTAGCAA TAACCGCGTT CCTTTCGCAC CGGAATTAAC CTACAATTTA
GCCGTTCAAT ATCGTAGTCC CGGTGGTATT TTTGCCCGTG CAGAATTGCG CGGTTATGGA
ATAACTTACT TTGATGATGC TAACCAAGTG AAGCAAGACC CCTATGCACT AGTAAATGCC
CGGATTGGTT ATGAGGGCGA AAAATATGGC ATTTATCTAT ATGCAAATAA CTTGTTTGAT
ACTCGTTATA TTACCTCTGG TTTCCTATTC CCACCACCTA ATGTAACTGC GGGATTTGGC
GACCCGGTAA CTTATGGTGT GCGAGTAAGT GCGAGTTTTT AA
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| Protein sequence | MECGAALKLN QYIYLGIAST ICLLITQKAN AQEKPINTKD IGLITNIPQL SDIQRPATSV
KDWLAQSAPT PPQIKITGVR INRTDDNFEL ILETPDGEIS APETLQEGNI FIADIPNAIL
ALPEGKVFRE DTPVDGISYV TVTQEESNNT VRVTISSPGN LPPIQVVNQS NNLTIALTPT
PTSPDIELIV TAQKRPEDAQ DVPLSLTVIP QQEIEDAQIR SFQDIANNTP NFSFLPTTAG
SADFSYYSVR GLNNFNFLAN QDTVGFYIDD VPFDYGGFLD VGLIDLERVE VLRGPQSTLY
GRSSPAGVVN VISRPPSNQP EMRISALYGS YNNRELQLSL SDAIIPDKLA FRLAGAYNAR
DGVFDNIFLN KPIGERSQLT GRAQILWTPT PEWNISFNAY ASDNDNGNPT FSRQNAQNPF
QVSQEVDGFN RLSTNTQALK ISYNGNGFRA TSITSRRFSN QNTLVGDNFP GDLLQQIIGI
NSTLWSQEFR LQSPESADRL RWLLGGYYES RNFNVLDDTF KYTDAGAVAF GVPAPGSDRV
SAEQNRQTYA IFGQIDYKPI APLTLFAGWR YETADAELDR RRVFVNPDGT VNPPTAEVRN
ATLNSDAFIP RFGLQYRFNP NLMAYATIAK GYRPSGFNYR ADTEDTRRFQ EETTWTYEVG
LKSSWLDDRL SANLSIFQSD VDNYQVLLTD DFGFFRNVTN ANVKVTGLEF ELKAKPLQGL
DLIAGIGYVD SKFKNYRNPF TNGDFSNNRV PFAPELTYNL AVQYRSPGGI FARAELRGYG
ITYFDDANQV KQDPYALVNA RIGYEGEKYG IYLYANNLFD TRYITSGFLF PPPNVTAGFG
DPVTYGVRVS ASF
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