| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1661 |
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| Symbol | hrcA |
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| ID | 3682217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 2084650 |
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| End bp | 2085747 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637717001 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_322179 |
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| Protein GI | 75907883 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.10502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.194823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTCC AGTTGACTAA TCGACAACAG CATATACTTT GGGCAACGGT ACGTCATTAC
ATAGCTACAG CAGAGCCTGT TGGTTCAAAA GCTTTGGTCG AAGAATACGA CTTGGGCGTT
AGTTCTGCCA CAATTCGCAA TGTAATGGGC GTACTAGAGA AATCTGGGTT ATTGTACCAA
CCGCATACAT CTGCTGGACG AGTACCTTCT GACTCAGGTT ATCGCATTTA TGTTGACCAG
TTAATTACCC CCTCTCTACG AGACACCACA CGAACAGAAG TGTTAGCAAA AGAGGTAGAA
TCAGCCCTAC AACAGCATTT GCAATGGGAA GACTGGAGTC TGGAGATACT GTTGCAAGGA
GCCGCCCAAA TTTTAGCTAG CTTGAGTGGG TGTATTAGCT TGATTACGAT GCCTCAAACC
AACACAGCAT CAGTCAGACA TTTGCAATTA GTGCAGATAG AAACGGGACG AATCATGCTG
ATTTTGGTGA CGGATAGTTA TGAAACCCAC TCGAAGCTGA TGGATTTACC CCCAGCCAGG
AGCGAAACAA AACCCGACCC AGAAGTAATT GACAGGGAAT TGCAGATTGT TTCTAACTTC
CTAAATAGTC ACTTACGGGG GCGGAGTCTG TTAGAAATCA GCACCCTAGA TTGGAGTCAA
TTAGATCGGG AATTTCAAAG TTATGGAGAG TTTCTGAAAA ATTCTGTAGC AGAACTAGCC
CACCGCAGTG CTGCGCCGGC TGCAACTCAA ATTATGGTAC GGGGTTTGGC AGAAGTGTTA
CGTCAACCAG AATTCTCCCA GCTTCAGCAA GTGAAAACGA TTATACAACT ATTGGAAGAA
GAACAAGAAC AACTGTGGCG ACTAATATTT GAGGAACCAG AGTTAGAAGA TACGCACAAA
TCCAAGGTAA CAGTGCGTAT CGGCGCAGAA AACCCCCTAG AACCGATACG CACCTGCTCC
TTAATTTCTT CTACCTATCG CCGGGGAGGA GTCCCGTTGG GTAGTGTGGG AGTTTTGGGG
CCGACACGCC TAGATTACGA AAGTGCGATC GCAGTTGTAG CGGCGGCGGC GGATTACCTC
TCAGAAGCCT TCAGTTAA
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| Protein sequence | MQVQLTNRQQ HILWATVRHY IATAEPVGSK ALVEEYDLGV SSATIRNVMG VLEKSGLLYQ
PHTSAGRVPS DSGYRIYVDQ LITPSLRDTT RTEVLAKEVE SALQQHLQWE DWSLEILLQG
AAQILASLSG CISLITMPQT NTASVRHLQL VQIETGRIML ILVTDSYETH SKLMDLPPAR
SETKPDPEVI DRELQIVSNF LNSHLRGRSL LEISTLDWSQ LDREFQSYGE FLKNSVAELA
HRSAAPAATQ IMVRGLAEVL RQPEFSQLQQ VKTIIQLLEE EQEQLWRLIF EEPELEDTHK
SKVTVRIGAE NPLEPIRTCS LISSTYRRGG VPLGSVGVLG PTRLDYESAI AVVAAAADYL
SEAFS
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