Gene Ava_1634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1634 
Symbol 
ID3681878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2053719 
End bp2054429 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content42% 
IMG OID637716974 
Producthypothetical protein 
Protein accessionYP_322152 
Protein GI75907856 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.823717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGG CAATTATGAG TAACAACATC CAAGGGTGCA AACAATTATT TGGCGCTAGT 
TTGTGTACCG CCATAACTTT AGTTACCAGT AGTAGTATTG CGGCTCAGGT ACAGATGGCA
AAACTGAATA ATTGGCGCTT TTACCCAGAC ACCAAAAAGC TAGAAATAAC CCTTTCATCT
AGTAAAACAC CACAGTACTT TTATTTAAAT GAACCGCCAA GACTAGTTGT AGATATTCCT
GATACTCAGT TAGGCAAGGT TTCTACACAG CAAAATTACA CAGGTTCGGT TCAAAGAGTC
CGTGTTTCTC AATTAAGCGC TAATGTTACT CGCATTGTCT TAGATTTAGC CCCAGGGTCT
ACTGTAGATG CAAACAAAGT ACAACTACAA CCTGCCACTC GACAAAACCC TACTCGCTGG
GTTTTACGTC CCGCAATTGT CAAAGTGGCT AAACAATCAA GCAACTTCCA ACAGTCACCC
AAAAATCAAC AACCAACAAC CCCTTCTTAT GTACAATTAC CTAGTACCCT GCCTCCCATA
ACTGGTCTGC AACAGCAACC GTTTGTCAGT GTACCGCCCC TCAACTCCAA TAATCCCACG
CCAAAATCCA GCAATTTTAA CAACGCTAAT TCTTCTAATC CTCCAGTCCC TACCCTACCT
AACTATCCAG TGATTGAGTT TGGTCAACCT TTACCTAAGT TCCCTAACTG A
 
Protein sequence
MSKAIMSNNI QGCKQLFGAS LCTAITLVTS SSIAAQVQMA KLNNWRFYPD TKKLEITLSS 
SKTPQYFYLN EPPRLVVDIP DTQLGKVSTQ QNYTGSVQRV RVSQLSANVT RIVLDLAPGS
TVDANKVQLQ PATRQNPTRW VLRPAIVKVA KQSSNFQQSP KNQQPTTPSY VQLPSTLPPI
TGLQQQPFVS VPPLNSNNPT PKSSNFNNAN SSNPPVPTLP NYPVIEFGQP LPKFPN