Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1634 |
Symbol | |
ID | 3681878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2053719 |
End bp | 2054429 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637716974 |
Product | hypothetical protein |
Protein accession | YP_322152 |
Protein GI | 75907856 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.823717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAGG CAATTATGAG TAACAACATC CAAGGGTGCA AACAATTATT TGGCGCTAGT TTGTGTACCG CCATAACTTT AGTTACCAGT AGTAGTATTG CGGCTCAGGT ACAGATGGCA AAACTGAATA ATTGGCGCTT TTACCCAGAC ACCAAAAAGC TAGAAATAAC CCTTTCATCT AGTAAAACAC CACAGTACTT TTATTTAAAT GAACCGCCAA GACTAGTTGT AGATATTCCT GATACTCAGT TAGGCAAGGT TTCTACACAG CAAAATTACA CAGGTTCGGT TCAAAGAGTC CGTGTTTCTC AATTAAGCGC TAATGTTACT CGCATTGTCT TAGATTTAGC CCCAGGGTCT ACTGTAGATG CAAACAAAGT ACAACTACAA CCTGCCACTC GACAAAACCC TACTCGCTGG GTTTTACGTC CCGCAATTGT CAAAGTGGCT AAACAATCAA GCAACTTCCA ACAGTCACCC AAAAATCAAC AACCAACAAC CCCTTCTTAT GTACAATTAC CTAGTACCCT GCCTCCCATA ACTGGTCTGC AACAGCAACC GTTTGTCAGT GTACCGCCCC TCAACTCCAA TAATCCCACG CCAAAATCCA GCAATTTTAA CAACGCTAAT TCTTCTAATC CTCCAGTCCC TACCCTACCT AACTATCCAG TGATTGAGTT TGGTCAACCT TTACCTAAGT TCCCTAACTG A
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Protein sequence | MSKAIMSNNI QGCKQLFGAS LCTAITLVTS SSIAAQVQMA KLNNWRFYPD TKKLEITLSS SKTPQYFYLN EPPRLVVDIP DTQLGKVSTQ QNYTGSVQRV RVSQLSANVT RIVLDLAPGS TVDANKVQLQ PATRQNPTRW VLRPAIVKVA KQSSNFQQSP KNQQPTTPSY VQLPSTLPPI TGLQQQPFVS VPPLNSNNPT PKSSNFNNAN SSNPPVPTLP NYPVIEFGQP LPKFPN
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