| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1629 |
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| Symbol | |
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| ID | 3681873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 2045566 |
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| End bp | 2047407 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637716969 |
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| Product | multi-component transcriptional regulator |
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| Protein accession | YP_322147 |
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| Protein GI | 75907851 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.703021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.230726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAATTC TGCTGGTAGA GGACGATGTA ATAACGGCGA CCTTACTGCG TGAGGTTCTC
ACGGCTGAGT ACTATACAGT TGAACTGGCA ACAGATGGTC AAAATGGGTT AACACTGGCG
ACTTTATCAA ATTTTGACTT GATATTGTTG GATCTGCTGA TTCCTAAACT TGATGGTATC
AACCTTTGTC GGCAACTCCG CGCTCAGGGC ATTCAAAAAC CGATTCTTTT ACTTACAGCC
AAAGATCAGA GTGCTGATGT TGTCAAAGGA TTAGATGCAG GTGCAGATGA TTATGTTACC
AAACCCTACG ATATCTCAGA ACTGCTGGCG CGGATACGAG CATTGCTGCG CCGAGGCAAG
ACGGAACTAA TACCTAACTT GCTGAGTTGG GAAAATCTTG ATGTTAATGT TATCTCCGCA
GAAGTTACCT ATAAAGGACA GCCTATATCT TTAAGCCCTA AGGAATATAG CCTGCTAGGG
TTGTTTTTAC GTAATCCCCA GCGTATCTTT AGCCGTAGCG AAATTATCGA TCGCCTGTGG
TCAATTGATG CTACACCAAG TGAAGGAGCT GTCACTAATT TGATTAAAGA TTTGCGACAA
AAGCTCAAGA TGGTGGGGAT GTCTGCCGAA CTGCTGGAAA CCGTCTATGG CTTGGGTTAT
CGACTAAAGA TGCCACCGCA AACTCAAGAC GGCGAACAAA GTCGAAAGAC AGATGGACTG
CGAAAAACCA AAAATCAAAC AGCAATTGCT GCCATAAATA AAACCATAGA ACGCTACAAA
GATACCTTTG CCCAACGAGT AACTTTGCTA GAGCGAGCCG AACAAGCCTT ACATACAGGA
CAATTGCTGC CCGAACTCAG GCAAGAAGCC AGTAACGAAG CACACAAACT AGCAGGGACG
CTGGGATCTT TTGGTTACGA AACAGGTTCA AAGTTAGCGC GAGCAATTGA ACATCTACTA
ATGAGGGACG AAAATTTAGC GTTAGAAGAT GCTGTGCAAC TCTCGGAACT GATTGGGCAA
CTCAAAGAAG CACTCAGTCA ATCGCCTATT TCCTTTACCA TTGAACAACT TGAGCCAGTT
CCACTTCCTT TAGTACTGGT TATCAATGAT GAATCTTTTG CCAATCAACT GAAAATAGAA
GCTGCTGTTT GGGGAGTGAG GATAGAAGTA GCCCTCAATT GGGAGAGCTA TCAACAAAGT
TTTTCTCAGT TTCCCAAGGT AATTTTACTC AAGATCAATG GGCAGAAATC GAGTCAAAAA
AGTCTAAAAT TATTGGAGCA ACTCAAACAA CAGTTTCCTA ATACGCCAAT TCTTGTCATA
GCAGAGCAAG ATAATCTTAT GCAGCGAGTA GCTGTTGCGC GTTTGGGAGT GCAGCGTTTT
CTCACCAAAC CTACCAATAC TGAAGTATTC CAGGTAATTA CCCAAATGTT AGCTCAATTC
CAAGGTAGTC AAGGAAAGGT GATGGTTATC GACGATGATC CGGTGATGTT GGATATATTG
AGCAATTTAC TCAAACCTTG GGGACTGGCG GTAAAGACCT TGCAAAATCC GCAGAAATTT
TGGGAGACAT TAATTACTAC AACTCCTGAC TTATTAATGA TCGATTTAGA AATGCCTACA
TATAGTGGTA TTGACTTGTG CCGTGTAGTG AGACAAGATT CTCATTGGGG AAATGTGCCT
ATTTTAGTAG TTACTGTCCA CACAGACATC AAATCCATTC AACAGGTGTT TGCCGCAGGA
GCCGATGATT TTATTGGTAA GCCTGTAGTC GGGCCAGAAT TAATAACTCG TGTCATTAAC
CGGATTAATC GTTCTCGTTT ACAGCAAAAA CTCAAAACCT AG
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| Protein sequence | MKILLVEDDV ITATLLREVL TAEYYTVELA TDGQNGLTLA TLSNFDLILL DLLIPKLDGI
NLCRQLRAQG IQKPILLLTA KDQSADVVKG LDAGADDYVT KPYDISELLA RIRALLRRGK
TELIPNLLSW ENLDVNVISA EVTYKGQPIS LSPKEYSLLG LFLRNPQRIF SRSEIIDRLW
SIDATPSEGA VTNLIKDLRQ KLKMVGMSAE LLETVYGLGY RLKMPPQTQD GEQSRKTDGL
RKTKNQTAIA AINKTIERYK DTFAQRVTLL ERAEQALHTG QLLPELRQEA SNEAHKLAGT
LGSFGYETGS KLARAIEHLL MRDENLALED AVQLSELIGQ LKEALSQSPI SFTIEQLEPV
PLPLVLVIND ESFANQLKIE AAVWGVRIEV ALNWESYQQS FSQFPKVILL KINGQKSSQK
SLKLLEQLKQ QFPNTPILVI AEQDNLMQRV AVARLGVQRF LTKPTNTEVF QVITQMLAQF
QGSQGKVMVI DDDPVMLDIL SNLLKPWGLA VKTLQNPQKF WETLITTTPD LLMIDLEMPT
YSGIDLCRVV RQDSHWGNVP ILVVTVHTDI KSIQQVFAAG ADDFIGKPVV GPELITRVIN
RINRSRLQQK LKT
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