| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1620 |
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| Symbol | |
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| ID | 3681864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2028672 |
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| End bp | 2030732 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637716960 |
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| Product | patatin |
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| Protein accession | YP_322138 |
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| Protein GI | 75907842 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3621] Patatin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.128083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0419711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATAAATC TAGCAAATAC ACAAACAGTC TTAAAATTTG ATGGGATAGA TGATTATATA
GATTTTGGCA AAAACGATAT TGGTGGTGTT TTTGCTCAAG GGAGTTCATG TTTTACGGTT
TCAGGATGGA TAAATCCTCA TAAATTAACA GAAAAATCCA CTAGCTATGG AACGCGGAAT
GTATTTTTTG CTCGTTCTTC AGATCGATAC AGTGATAATT TTGAATTCGG TATCAGTGAG
ACAGGGAGTT TAGATATCTT CATTGATGAA ACCATTAGCA AGGGTATCAG AACTTTTGGT
AATGGAGAAT TAACTATAGG ACAATGGCAC TTTTTCGCCA TTGTTTTTAA TAGCGGTCAA
ATCACAGTAT ATCTTGATGA TCATGAATAC AATGACTCTC TGAGAGGTTC ATCTTTAAAC
AAAGCAACAA GCTCTGTAAC TTTGGGTGCA ACCTTACACA AGCAAGTCTA TTTTACAGGA
CAATTAGCAA ACATCAGCGT CTGGAATTAT CCATGTACTC AGGTACAAAT TAAGACCCAT
CATTGTGGGC TAATAGTCGG GGATGAACCA GGATTAGTGG CTTACTGGAA ATTAGATGAA
GGCCAAGGAA CAACAGTTAA AAACAAAGCT GGAAAATCTT ATCAAGGAAA TTTTCGGGGT
AATCCTAGCT GGGATTTAGC GCAAATTCCA TTTGCAGCAC CATTATCCAG TCAAGACGAT
ATCCAGGAGG ATGTCCAATT TGAGATAGGA ATTATTGCCG AAACAAGTAT TTCAACATTA
ACTACAGATT TATTGGCAGC AACAGTACCG CTAGTTAGTA ACAACGAAGA CCAAACAATA
GAAATTCAAT ATCCAGAAAT AAATAGCGAA AAATCAGAGA TTATTGCAAA CTTGATCAAT
CTCCCATCAC ATGAAGAAGC AAGCAAAACA GACCAAACTG AAGTTCTTGT AAATAGCCAA
CAATTACAAA CATTCATTCA GGCAGAATCG CCAGAAACCA TGAATACAAA ATCCCGTCCC
AGATATAAAA TACTTTCCAT TGATGGTGGT GGTATTCGGG GCATTATTCC TGCATTACTC
TTAGCAGAAA TTGAACGACG GACACAAGAG CCTATATTTA GTTTATTTGA CTTAATTGCT
GGTACTTCAA GCGGCGGAAT TTTAGCACTG GGACTAACTA AACCCCGATT AAATTCATCT
GAAGAATTGC CCTTAGCTGA ATACACCGCT GAAGACCTTG TACAATTATT TCTTGAGTAT
GGAGTAGAAA TATTTTATGA GCCATTATTT GAAAGACTAC TTGGCCCGTT AGAAGATATA
TTTCTCCAGC CAAAATATCC TTCCACAAGC AAAGAAGAAA TCTTAAGGCA ATATTTGGGT
AAAACTCCTC TAGTAAATAA TCTTAAAGAA GTTTTTGTCA CTAGTTACGA TATCGAGCAG
CGAATTCCGG TATTTTTTAC AAACCAACTA GAAAAACAGC AAATAGAATC TAAGAATTCT
CATAATTTAT GTGGTAATGT ATCCCTCTTA GATGCCGCAT TAGCCACTAG TGCTACCCCG
ACTTATTTTG CTCCTCATCG TATCGTCAGC CCCGAAAATA GTGCGATCGC TTATACTTTA
ATTGACGGGG GAGTATTTGC TAATAACCCA GCCCATTTAG CTATTTTAGA AGCGCAAATT
AGTAGTAAAC GCAAAGCCCA AACAGTCCTT AATCAAGAAG ATATTTTAGT AGTTTCTTTA
GGTACAGGTT CGCCAACAAG TGCTTATCCT TATAAAGAAG TCAAGAATTG GGGACTTTTA
CAATGGGGAA GACCACTTTT AAATATTGTG TTTGACGGTG GTAGCGGTGT GGTATCTGGA
GAATTAGAAC AGTTGTTTGA ACCTAGCGAT AAAGAAGCTA AAAGTTTTTA TTATCGCTTT
CAAACATTGT TAGATGCAGA GTTAGAAGCA ATAGATAATA CGAAACTACA AAATACTCGT
CAGCTACAAG CTATAGCCCA CAAACTGATT TCTGAAAAAA GTCAACAAAT CGATGAACTT
TGTGAGCTTT TGTTGGGCTA A
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| Protein sequence | MINLANTQTV LKFDGIDDYI DFGKNDIGGV FAQGSSCFTV SGWINPHKLT EKSTSYGTRN
VFFARSSDRY SDNFEFGISE TGSLDIFIDE TISKGIRTFG NGELTIGQWH FFAIVFNSGQ
ITVYLDDHEY NDSLRGSSLN KATSSVTLGA TLHKQVYFTG QLANISVWNY PCTQVQIKTH
HCGLIVGDEP GLVAYWKLDE GQGTTVKNKA GKSYQGNFRG NPSWDLAQIP FAAPLSSQDD
IQEDVQFEIG IIAETSISTL TTDLLAATVP LVSNNEDQTI EIQYPEINSE KSEIIANLIN
LPSHEEASKT DQTEVLVNSQ QLQTFIQAES PETMNTKSRP RYKILSIDGG GIRGIIPALL
LAEIERRTQE PIFSLFDLIA GTSSGGILAL GLTKPRLNSS EELPLAEYTA EDLVQLFLEY
GVEIFYEPLF ERLLGPLEDI FLQPKYPSTS KEEILRQYLG KTPLVNNLKE VFVTSYDIEQ
RIPVFFTNQL EKQQIESKNS HNLCGNVSLL DAALATSATP TYFAPHRIVS PENSAIAYTL
IDGGVFANNP AHLAILEAQI SSKRKAQTVL NQEDILVVSL GTGSPTSAYP YKEVKNWGLL
QWGRPLLNIV FDGGSGVVSG ELEQLFEPSD KEAKSFYYRF QTLLDAELEA IDNTKLQNTR
QLQAIAHKLI SEKSQQIDEL CELLLG
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