Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1325 |
Symbol | |
ID | 3682971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1626204 |
End bp | 1629452 |
Gene Length | 3249 bp |
Protein Length | 1082 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637716663 |
Product | SNF2-related helicase |
Protein accession | YP_321844 |
Protein GI | 75907548 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTTG TTACTGGGCA AATTGTGCGG GTGCGATCGC GGCAGTATCT TGTAGAAGAT GTAGTGGCTA AACCTTTGGT GAAGGAAGAC ACTTTAGTTT GCCTTTCGTG TTTAGAAGAT GATGCGTTAG GTGAACAGTT AGAAGTTCTT TGGGAAAGAG AAGTTGATGC CAAAGTCATA GGTAAAACTT CGTGGGAGTC CATAGCAAAC CGAGGTTTTG ACAATCCCCG TCTATTTTCG GCTTATCTCC ATACTCTGCG CTGGAATTGT GTTACCTCAA CTGACCCAAA ACTGTTTCAA GCACCATACC GTGCAGGTAT TGAAGTCAAA GCTTACCAGC TTGAACCGCT ACGTAAAGCT TTATTAATGC CTAGAGTTGC TTTGTTTATT GCTGACGATG TTGGTTTAGG GAAAACCATA GAAGCAGGTC TGATTTTAAG AGAAATGTTG ATGCGGCAAA AAGTTCGCCG TGTTTTGATT TCCTGTCCGC CGTCGGTTGT ACGGCAATGG CAAGAAGAAA TGGAAAGCCG CTTCGGGCTA ACTTTTGTAA TTTTTGACCG TGAGTTTGTA GCTAGTCGTC GTCAAGAACG CGGTTATGGA ATTAACCCTT GGACAACTCA CAGCCGCTTC ATTATTTCTC ATGCTTTGTT ACGTGATGAA ACCTATGCTG CTCCTTTGCG TGATTGGTTG GGAGATTTTA CAGGCGCATC AATGCTGATT CTTGATGAAG CACACAACGC AGCCCCAGCT AGTGGTGCGA AGTATGCTGT AGATTCTCAG TTAACACGTA CTGTCCGCGA TATAGCACCA CGGTTTGAAC ATAAGCTGTT TCTTTCTGCT ACGCCTCATA ATGGTCATTC CAATAGTTTT GCAGCTTTAT TAGAAATCCT CGACCCGCAA CGGTTTTGTC GAGGTGTCCC TGTGCGAGAT AGCAAACTTT TAGATACAGT GATGGTGCGG CGATTAAAAC AAGATTTACG GGAGATTGGC GAAGAGTTTC CCGAACGACG GGTTATTCCT ATCGTCATCG ATAACCTTCC AGAAGATGCG CCGGAGTTGA AACTGTCGCG GTTGCTGCAA GAATACCGCA GTCTAAGGGA AGAACGGCTC AAGGAAGCAT CGAAGTCAAC TCAAAATGCG GCGATGCTGG TAATAACTTC GCTGCAAAAG CGTCTGCTAT CTTCCATTGA AGCTTTTGCA CGCACTTTAA AAGTTCATCG GGCGGCAATT GAAAAGCAAT CTGTTAACCG TTCTGCAAAC GCCATAGAAA ATTTACCGTT GCTATTAGAA CCCCCTGGTG CTGACGATGA ACGGGCTGAA CTAGCAGAAG AAGAAGTACA AGCAGAAGAA GATACTCAGG TAATGGTGGC TACTGGGCAG GCTGCAAGCT TTGGGTTAAG CAGCCGGGAA TTGGAAATTT TAGAAGAGAT GACCGATGTA GCCAACCAAG CTAGATATCA AGCAGACCCA CGAGTTGAAA AATTAGTGGC ATGGATTAAA CAAAATCTCT GTCCTGATTT GGGTAAACCT AATGCTGCTT GGTTAGAGAA GCGAGTCATT ATATTTACTG AATATACAGA TACAAAACGC TACTTACAGC AAAAACTTCA GGAAGCCATT GCAGGTTCAG ATAAAGAACG CGATAGCGAA GCGCTACGGC GAAACGCCGA ACGCATTGAT GTATTTCATG GTGGTATTGG CGAAGAACGC CGGGAAGCTA TCAAAAATGC CTTCAATGCT GACCCATTGC GTCACCCCCT CCGCATTCTC ATAGCCACGG ATGCAGCAAG GGAAGGGGTA AACCTGCAAA ACAATTGTGC TGACCTATTC CATTTTGATG TGCCTTGGAA CCCGTCGAGG ATGGAACAGC GCAACGGGCG TATTGACAGA AAATTACAGC GATCGCCTAT TGTTCACTGC TACTACTTTG TTTTAGCGCA ACGGACAGAG GACAAAGTAT TGAAAGTGCT GGTGAAGAAG ACCGAAACAA TTCAAAAAGA ATTGGGGACG CTTTCGCCAG TGGTGCAGAA AAATTTATCG CGTCTGCTGG AAGGTGGTAT TCGCCACAAT CAGCTAACTA ATATTACTGC TTCCATAGAA CAAGCTGATT TACCTAATTT ACAGATAGTA AATGAGGAAT TGGAAGAAAA TCGACTGCGG AGAGAAGAAT TAACCAAGCA ATTATCCCAG TTGCAAGAGA TGTTGAAAAC ATCGCGGGAT TGGTTGGGAC TGAGTGATGA ACACTTCCGC AATGCTATTT CCGCTTCTTT AGAAATTCTC GGCGCGACTC CTCTGACTCC AGTCAATAGC AATGAAGCTT GTCAAGATTC GGCTACTGCA CGCTGGACGC TTCCACCCCT TGACCAACGC GCAGACCCGA CATGGGCGAA TACTCTTGAT ACCTTAAGAC CGCCACGCAA GAAAGGACAA AAGCCTTGGG AATGGCGACG GGAAGCAGCG ATTCGTCCGG TAGTATTTCG TGACCCTGGT TCATTGGATG GGGATGTAGT TCACCTGCAT TTAGAACATC GGGTGGTACA GCGTCTTTTA GGGCGATTTT TAGCCCAAGG GTTTTTACAT GATGAGTTAA CCCGCGCTTG CGTTTGCCTA ACTGATGACC CAATTCCGAA AGTTCTCGCC TTGGGACGGT TATCTGTTTA CGGACAGGGT GCGTCGCGGC TGCATGACGA AGTAATTGCG ATCGCGGCGG AATGGTCAGA CCCAGCCGCG AGGGGACGCA AGAAACTACA ACCGTTAAAC GAAGGGGAGA AAGACAACGT ACTGGCTTTA TTGGAAGATT CTTTAGCTTC TCCTCGTTTG CAAAAAGCAT CCCAGACTGT TAAGGAACTG CTAAAGCAGA ATGCTACTCA AGATATTGCT GATTTGATTC CCCATTTAGA ACGTCGTGCC AATATTTTGG CGCAAAGGGC TGAGAAAAAG TTAACCGAAC GGGGCAAAAA AGAAGCTGTA GAGATGAAAA AAATTCTCGA ACAGCAGCAG CAGCGTATTA GCCAACGTAA GCAGGAAATT GAAAATACCA AAGCTATCCA GCTATCAATT CCATTTGCAG AGTTCCCTGT CGAGGAAAAA CGGCAGTTAG AAGCAGACCG TCGCCACTGG GAGAAGCGAT TGAAAGACCT GGCTGAAGAA ATTATTTCTG AACCTGCCCG AATTGAGGCT TCCTACGAAG TTAGGGCGGT GCGAGTTGAA CCTGTGGGGT TGATTTATTT ATGGCCAGTT TCGGGTTGA
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Protein sequence | MSVVTGQIVR VRSRQYLVED VVAKPLVKED TLVCLSCLED DALGEQLEVL WEREVDAKVI GKTSWESIAN RGFDNPRLFS AYLHTLRWNC VTSTDPKLFQ APYRAGIEVK AYQLEPLRKA LLMPRVALFI ADDVGLGKTI EAGLILREML MRQKVRRVLI SCPPSVVRQW QEEMESRFGL TFVIFDREFV ASRRQERGYG INPWTTHSRF IISHALLRDE TYAAPLRDWL GDFTGASMLI LDEAHNAAPA SGAKYAVDSQ LTRTVRDIAP RFEHKLFLSA TPHNGHSNSF AALLEILDPQ RFCRGVPVRD SKLLDTVMVR RLKQDLREIG EEFPERRVIP IVIDNLPEDA PELKLSRLLQ EYRSLREERL KEASKSTQNA AMLVITSLQK RLLSSIEAFA RTLKVHRAAI EKQSVNRSAN AIENLPLLLE PPGADDERAE LAEEEVQAEE DTQVMVATGQ AASFGLSSRE LEILEEMTDV ANQARYQADP RVEKLVAWIK QNLCPDLGKP NAAWLEKRVI IFTEYTDTKR YLQQKLQEAI AGSDKERDSE ALRRNAERID VFHGGIGEER REAIKNAFNA DPLRHPLRIL IATDAAREGV NLQNNCADLF HFDVPWNPSR MEQRNGRIDR KLQRSPIVHC YYFVLAQRTE DKVLKVLVKK TETIQKELGT LSPVVQKNLS RLLEGGIRHN QLTNITASIE QADLPNLQIV NEELEENRLR REELTKQLSQ LQEMLKTSRD WLGLSDEHFR NAISASLEIL GATPLTPVNS NEACQDSATA RWTLPPLDQR ADPTWANTLD TLRPPRKKGQ KPWEWRREAA IRPVVFRDPG SLDGDVVHLH LEHRVVQRLL GRFLAQGFLH DELTRACVCL TDDPIPKVLA LGRLSVYGQG ASRLHDEVIA IAAEWSDPAA RGRKKLQPLN EGEKDNVLAL LEDSLASPRL QKASQTVKEL LKQNATQDIA DLIPHLERRA NILAQRAEKK LTERGKKEAV EMKKILEQQQ QRISQRKQEI ENTKAIQLSI PFAEFPVEEK RQLEADRRHW EKRLKDLAEE IISEPARIEA SYEVRAVRVE PVGLIYLWPV SG
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