Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1277 |
Symbol | |
ID | 3683117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1564732 |
End bp | 1565904 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637716615 |
Product | LL-diaminopimelate aminotransferase |
Protein accession | YP_321796 |
Protein GI | 75907500 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.306005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTTG CTAAACGTTT AGAAAAAATT CCTCCTTATT TGTTTGCTGA AATTAACCGT AAACGGGAAG CACTGATTGC CCAAGGAGTT GACATCATTA ATATAGGAGT CGGTGATCCT GATAAGCCAA CTCCTGCTCA TATTCTCCAG GCGATGCGTG AGGCAATTGA TGAAGCTTCT AACCATAACT ATCCACCTTA CGAAGGCACA CAAGAGTTTA GAGAAGCAGC CGTAAAGTGG ATGGAACGTC GATTTGGGGT AGTGGATTTA AATCCCAACA CGGAAGTTGT TTCTTCTATT GGTTCCAAAG AGGCTATACA TAATACTTTT TTAGCTTTTG TGGAAGCAGG AGATTACACA TTAATACCAG ATCCTGGTTA TCCCGTGTAT AGAACTTCCA CGATTTTTGC TGGGGGCGAA CCTTTCACCA TGCCTCTGAA AGCGGAAAAT AAATTTTTAC CCGATTTAGA TTTAATCCCT GAGGAAGTTG CCCGTAAAGC GAAAATGTTG TGGGTTAATT ATCCTAACAA CCCTACTGGG GCTTTAGCAA CACTAGAGTT TTTTGAGGAA TTAGTAGCTT TTTGTCAGCA GCACAGTATT TTGTTGTGCC ATGATCATGC TTATTCAGAA ATGGCGTATG ATGGCTACAA ACCACCAAGT GTCCTGCAAA TTCCAGGTGC GAAGGACATT GCCATTGAGT TTCACAGTCT ATCGAAGTCA TACAATATGA CAGGCTGGAG GATTGGATTT GCGGTTGGTA ATGCCTATGC TATTCAGGGC TTGAGTCAGG TAAAAACGAA TGTTGACTCT GGAGTATTTA AAGCAATTCA AAAAGCTGCG ATCGCAGCTT ACAACACCGA TGAAGTAGAA CTACAAGCTG TGATGTCAGT TTACCAAAAT CGTCGTGACA TTATTGTTAA GGGATTGCAA TCTTTAGGAT GGCCTATCGA ACCACCAAAA GCTACTCTTT ATGTTTGGGT TCCTGTACCG CCTGGATACA CCTCTACTGA ATTTACTACT TTGCTGCTCG ATAAATGTGG TATCGTCGTT CCCCCAGGGG TTGGCTATGG CGTGTCAGGT GAAGGTTATT TTAGAATTGC CCTCACCATC TGTGAGGAAC GTTTGCATGA AGCTATTCAA CGGATGCAGG ATGCGGGAAT TCGATATTCT TAG
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Protein sequence | MQFAKRLEKI PPYLFAEINR KREALIAQGV DIINIGVGDP DKPTPAHILQ AMREAIDEAS NHNYPPYEGT QEFREAAVKW MERRFGVVDL NPNTEVVSSI GSKEAIHNTF LAFVEAGDYT LIPDPGYPVY RTSTIFAGGE PFTMPLKAEN KFLPDLDLIP EEVARKAKML WVNYPNNPTG ALATLEFFEE LVAFCQQHSI LLCHDHAYSE MAYDGYKPPS VLQIPGAKDI AIEFHSLSKS YNMTGWRIGF AVGNAYAIQG LSQVKTNVDS GVFKAIQKAA IAAYNTDEVE LQAVMSVYQN RRDIIVKGLQ SLGWPIEPPK ATLYVWVPVP PGYTSTEFTT LLLDKCGIVV PPGVGYGVSG EGYFRIALTI CEERLHEAIQ RMQDAGIRYS
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