Gene Ava_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1216 
Symbol 
ID3683256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand- 
Start bp1498400 
End bp1499092 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content42% 
IMG OID637716554 
Producthypothetical protein 
Protein accessionYP_321735 
Protein GI75907439 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.057912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATCA ACGCAATTCT TGTACCACAA GGTTCTGAAT ACATGGCTGT GTGTCGCGGC 
TTAAGTCGAG TCACTATTAA AACGCCTAAA ATTATACCAG TGCCAGTAGG TATCAAGCCG 
TTAACGAAGT ACCTCCAACA ATTGCCAAAG CAGGAATACT CCGCCTGCGA TTTACAACCA 
AAAGTCCTGG TTATGGGTCT ATGTGGCAGC TTAACACCGC AATATCATAT TGGGGATGTG 
GTGTTGTATG AAAGTTGTAT TTATCAGGAA CAATTGCAAG TCTGCGATTC TGCCTTCACT 
ACAGAAATAC GCTCAGCACT AAAAACTCAT TATCCAAGGC TGAAGTTAGT TAAGTCATTG 
ACAAGCGATC GCGTTATTTG CTCTGCTTCA GAAAAACGAC ATCTTGGCAA AACTTTAGGT 
GCTGATGTCG TTGATATGGA AGGATTTGCT ACCCTAGAAT ATTTCAATGA ATCTGGTGTA 
GCAGTAGCTA TGCTTAGGGT AGTTAGCGAT GATTGCCATC ACGATATCCC TGACATCACA 
GCAGCCATCA ATCCCGACGG TTCTCTACAA CCTTTATCCT TAGGATTAAG ATTCCTGGGT 
CAACCTATTG CAGCTGCTCG GCTAATTCAA GGTTCCCTGC GGGGACTAAA AGTGTTGGAA 
GAAGTGACAA AATTACTTTT TTCTGAATTT TAA
 
Protein sequence
MTINAILVPQ GSEYMAVCRG LSRVTIKTPK IIPVPVGIKP LTKYLQQLPK QEYSACDLQP 
KVLVMGLCGS LTPQYHIGDV VLYESCIYQE QLQVCDSAFT TEIRSALKTH YPRLKLVKSL 
TSDRVICSAS EKRHLGKTLG ADVVDMEGFA TLEYFNESGV AVAMLRVVSD DCHHDIPDIT 
AAINPDGSLQ PLSLGLRFLG QPIAAARLIQ GSLRGLKVLE EVTKLLFSEF