Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1063 |
Symbol | |
ID | 3678576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1294550 |
End bp | 1294882 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637716399 |
Product | transcriptional regulator |
Protein accession | YP_321582 |
Protein GI | 75907286 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0576989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000107529 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGCTG AAGCACAAAA AGATGAAAAG CTAACTTGTG AAGTGGAAAC CACTTTGAAG GTAATTGGCG GACGCTGGAA GGTTTTAATT ATCAGAGAAT TAATGTTAGG TATCAAACGA TTTGGGGAAT TGCAGCGAGC CTTACCCGGA ATTACACAAA AGATGCTTAC CCAACAACTG CGAGAAATGG AAGACGACGG GATTATACAT CGACAAGTTT ATGCACAAAT CCCCCCAAAG GTAGAATATT CTTTAACACC TTTGGGGGAA AGCTTACAGC CAATTCTCTA TGCTATGCAC GAATGGGGTG TGAAGCATTT AGCAAACAAA TAA
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Protein sequence | MKAEAQKDEK LTCEVETTLK VIGGRWKVLI IRELMLGIKR FGELQRALPG ITQKMLTQQL REMEDDGIIH RQVYAQIPPK VEYSLTPLGE SLQPILYAMH EWGVKHLANK
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