| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1044 |
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| Symbol | |
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| ID | 3678596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1269431 |
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| End bp | 1270753 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637716380 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_321563 |
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| Protein GI | 75907267 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.041441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00655602 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTAGACA AATATAAAAC TCAGATTTTA TTCTCATTTC GTCAAAAGTT TGGCTCTGAC
AAGTTAGCGG TTATTCAAAA TATAGCTTGG TTATTCATTG ATCGCATTCT TCGTATGGGT
TTTGGGTTAG TTGTAGGTGT TTGGATTGCT CGTTATTTAG GAGTGCAGCA ATTTGGTCTT
TTTAACTATG CCACTGCTTT CGTAGCACTA TTCAATCCTT TGACAACTCT AGGGCTAGAT
AACTTGGTCA TACGTTCTAT TGTGCGTGAA CCTGAAGCTA GATACCAAAT TTTAGGGACA
GCTTTTTTGC TCAAGTTAGC TGGTGGAATA GGATGCGTAT TGTTAACAGT TAGCTCTATT
TTTGTATTGC GTCAAAATGA CCAGTTGACT ATTGGGATAG TAGCAATTTT AGCAACGGCA
GGGATATTTT CTGCTTTTGA CACGATTGAC ATTTGGTTTC AGTCTCAAGT GCAGTCTAAA
TATACTGTAG TTGCTAAAAA CACCGCATTT ATTATCATTG TACTCTTAAA AGTTACTTTG
ATTAAAATGC AGGCACCATT ACTTGCCTTT GCTTGGGCTG GATTAGCAGA AATTGGATTG
GGTGCAGCAG GTTTAATACT CGTTTACAAA GCTAAAGGTT ATTCACTATG GTTATGGCGT
TGGAATCTTC CGCTTGCTAA GACTTTTCTT AAGGAAAGCT GGCCTTTGAT GTTATCTGGT
TTAAGCATCA TGATTTATAT GAAAATCGAC CAGATTATGT TGGGGGAAAT GGTTGATGCT
AGTGCCGTAG GTCTTTATTC AGCAGCAACC CGTATTTCCG AAGTTTGGTA CTTTATACCA
ATGGCGATCG CTTCTTCAGT TACTCCTTCG ATTTTTGCAG CTAAAGAAGT AAGTGAAGAA
CTTTATTATC AACGAATAAA AAAACTACTC CGAGGGTTGG TATTGATTTC AATTGTAATT
GCTTTACCAA TATCATTTAT GTCTGAAACA ATAGTTACCT TATTATTTGG TAATGGCTAT
ACCGCAGCAG GAGCAGTATT AGCAATTCAT GTCTGGGCTT CTTTGTTTGT ATTTATGGGG
GTTGCTACAT CCTCTTGGTT TGTTGCAGAA GGTTTAACTC ACCTTTCTTT ACGCAGAACA
CTAATTGGTG CAATTACCAA TATTTTGTTA AACCTATTGT TAATTCCTCA CTATGCTGGA
GTTGGTGCTG CGATCGCAAC TGTAATTTCT TATGTAATTG CCGCATTTCT AGCCAATCTT
TTTCACTCAA AAAGCCACAA AATTTTCTGG CTTCAATTTC AATCAATTTT ATTATTTTTA
TAG
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| Protein sequence | MLDKYKTQIL FSFRQKFGSD KLAVIQNIAW LFIDRILRMG FGLVVGVWIA RYLGVQQFGL
FNYATAFVAL FNPLTTLGLD NLVIRSIVRE PEARYQILGT AFLLKLAGGI GCVLLTVSSI
FVLRQNDQLT IGIVAILATA GIFSAFDTID IWFQSQVQSK YTVVAKNTAF IIIVLLKVTL
IKMQAPLLAF AWAGLAEIGL GAAGLILVYK AKGYSLWLWR WNLPLAKTFL KESWPLMLSG
LSIMIYMKID QIMLGEMVDA SAVGLYSAAT RISEVWYFIP MAIASSVTPS IFAAKEVSEE
LYYQRIKKLL RGLVLISIVI ALPISFMSET IVTLLFGNGY TAAGAVLAIH VWASLFVFMG
VATSSWFVAE GLTHLSLRRT LIGAITNILL NLLLIPHYAG VGAAIATVIS YVIAAFLANL
FHSKSHKIFW LQFQSILLFL
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