Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1015 |
Symbol | |
ID | 3679928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1224465 |
End bp | 1226660 |
Gene Length | 2196 bp |
Protein Length | 731 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637716351 |
Product | Outer membrane efflux protein |
Protein accession | YP_321534 |
Protein GI | 75907238 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0127212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGGAC AACACTTATT CTATAGTTTC TTGCCTGGTG TAACAGCAGC AGTATTGACG ACTCAGCCAG CTGTGGCTGA AGCAATGAAA GTAAGTAGTG TACAACTTGT GCCTTCTTCT AGTGTTGTGA CTACTCAAAA TAGTCAAACT TTGCTAGTAG ACAAAAATCA GACACAACTG CCTAATGCTA CAGTCCAGAT TTTTCCAGAC ATCATTCCCA CTTCTGGTGT GACTACACCA AATTTACAAT TTTCCAGTAG TCACAGTCAC CCAGTAATCT TGACAGAAAA TACTGGTATC GATAGAGAAC AAAAATCCCG AAAAGATGAA GTTAAAAATT TCCCTCTCAA ATCTAAACTG ACTCTTTCTC AAAGGCTAAA ACAAAAGCGT TTTCCCAGCC AACAAAAACA AATTAACTCA GGGATTACTA AACCGAAGTT AGTAACAAAA GTAGCTTCTG CTACCTCTAC TACGCTGCTG GCTGGACAAC AAACTTTTTC TCCGTCTTAT ATACAAAATC CTGCGCCACA GAAAAAACTG CAAACCCAGT TACCAATGGT TTTACAGGCA ACAGCAAATC ACGTCGGCGC AGCAAAACTC CTAAATATCA GCAGTTGCTC ACCACAAACT TGTCAACTCA CCAAGCTAAC CGGACAGCAG ATAGCTCAGG GTAATACTAC ACAAGACCCT ACTGCTGCTC CTGTACCGGA AGAATCAACC ATAGTAGATA TTCAAGCGCC GACAGATACT CCTGTCCAGA CGGAATCAGT ACCAGCAGAT ACTCAGTCAC CAAGAGTTGC ACCTGTCCAG ACGGAATCAG CGCCAGTAGA GACTCAAGCA CCTGTAGGTG CTGTAGAAGT GCCACCAAAC CTGATTCCCA ATGCCAATCC TCTGCAATTT CCCACCAAAC CAGAAGAAGT GACACTCAAG GAGAATCAGC CGATTACCTT GACTCAGGCG CTGGAACTGG CACGGCGGAG CAATCGGGAT TTACAAGTTT CTCTGTTGGA ACTGCAACGC ACTCAAGCCC TGCTACGAGA AGCACAGGCA GCTTTATTAC CTAATTTATC TGTCAGTAGT GATGTTACCC GCAGTCAGTC TGCCGGCGGT CAACTCCAGA ACGAACTGAT TAGTAAACAG GGGGGAGTTG GCAACAACGA TGAACCTGGT ACAGCCTTTA ATAGCCAAGC ACAATTATCC TACGACCTTT ATACTTCTGG GAGAAGGAAA GCTGCTATTC AAGAAGCTGA GGAACAAGTA CGTTTTAATG AATTGGATGT AGAGCGTCAG TCAGAAGAAA TTCGCTTGAG CGTGACTAGA GCATATTACG ACTTGCAACA GGCAGATGAA CAAGTCCGTA TTGCTCGGTC GGCGGTAGAA AATGCCCAAG CTAGCTTGCG AGATGCGGAA GCCTTAGAAA GGGCTGGGGT GGGTACTAGA TTTGATGTGC TGCGATCGCA AGTAAACTTA GCTAATAACA CCCAACAGCT AACCAATAAC CTATCTCGGC AACAAACCAC TCGCCGTCAA CTAGCAACCC TGTTAAGCAT TCCTCAGGCG GTAAATATCA GCGCTGCCGA CCCTGTACAA TTAGCAGGGC TGTGGAACCA ATCCCTAGAA CAAAGCATCA TCCTCGCTTA TCAAAACCGT CCCGAATTGC ATCAGCAGTT GGCACAAAGA AACATCAGCG AGCAACAACG TCGGCAAGCA TTAGCAACCT TGGGGCCACA AGTCAGCTTC GTTGCTAACT ACAACTTACT GGATCAGTTT GATGATGGTG TCGGTCTGAC TGACGGTTAT TCTGTTGGGG TGAGAGCAAC CTTAAATCTG TACGATGGTG GAGCCGCTAG AGCCAGAGCA TCCCAAGCTA GAGCTAATAT TGCGATCGCC GAAACTCGAT TTGCTAGCCA GCGAGACCAA GTCCGCTTCC AAGTAGAGCA GGCCTTTACC AACCAACGCT CCAACCTAGA AAACGTGCAA ACTGCCAATG TTGCCCTAGA ACAGGCTAGA GAAGCACTGC GTCTAGCGCG GTTGCGTTTC CAAGCTGGTG TAGGTACTCA AACAGATGTG ATTAACTCAG AAAACGACTT AACACAGGCT GAGGGTAACA GAATCACTGC AATTCTCGAT TACAATCGTG CCTTAGCTGA ACTACAACGT GCTGTTACTT CTAGAGCATT AATTAGTAGT CAGTAG
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Protein sequence | MKGQHLFYSF LPGVTAAVLT TQPAVAEAMK VSSVQLVPSS SVVTTQNSQT LLVDKNQTQL PNATVQIFPD IIPTSGVTTP NLQFSSSHSH PVILTENTGI DREQKSRKDE VKNFPLKSKL TLSQRLKQKR FPSQQKQINS GITKPKLVTK VASATSTTLL AGQQTFSPSY IQNPAPQKKL QTQLPMVLQA TANHVGAAKL LNISSCSPQT CQLTKLTGQQ IAQGNTTQDP TAAPVPEEST IVDIQAPTDT PVQTESVPAD TQSPRVAPVQ TESAPVETQA PVGAVEVPPN LIPNANPLQF PTKPEEVTLK ENQPITLTQA LELARRSNRD LQVSLLELQR TQALLREAQA ALLPNLSVSS DVTRSQSAGG QLQNELISKQ GGVGNNDEPG TAFNSQAQLS YDLYTSGRRK AAIQEAEEQV RFNELDVERQ SEEIRLSVTR AYYDLQQADE QVRIARSAVE NAQASLRDAE ALERAGVGTR FDVLRSQVNL ANNTQQLTNN LSRQQTTRRQ LATLLSIPQA VNISAADPVQ LAGLWNQSLE QSIILAYQNR PELHQQLAQR NISEQQRRQA LATLGPQVSF VANYNLLDQF DDGVGLTDGY SVGVRATLNL YDGGAARARA SQARANIAIA ETRFASQRDQ VRFQVEQAFT NQRSNLENVQ TANVALEQAR EALRLARLRF QAGVGTQTDV INSENDLTQA EGNRITAILD YNRALAELQR AVTSRALISS Q
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