Gene Ava_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0969 
Symbol 
ID3680232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1171766 
End bp1173712 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content46% 
IMG OID637716303 
Productputative amino acid transporter 
Protein accessionYP_321488 
Protein GI75907192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAC TAATTACTTC TACACAACGA CTCGGCAGAC AGTTGATGGA CTGGTTGCTG 
GAAGAAGATA GACAAGAGAA AGAAGGCCCT TACCGTAAGG AAGAAGCCCA CCGCAAGCAT
TCCTGGTGGC AGGTCATGTG TTTGACTGGC GTAGATTATT TTTCTACCCT TGGTTATCAA
CCAGGTATTG CGGCACTAGC AGCCGGCGCT CTTTCTCCGA TAGCGACGCT GATTTTAGTT
CTACTAACAC TTTTTGGTGC ATTGCCCATT TATCGTCGCA TTGCTAGTAA AAGTCCACAT
GGACAAGGAT CTATTGCCAT GTTGGAGCAT TTGCTTTCTT GGTGGCAAGG CAAATTACTC
GTATTGTGCC TGCTCGGTTT TGTGGCGACA GACTTCATCA TTACGATTAC TCTCTCGGCT
GCTGATGCTA CAGCCCATAT CATCGAAAAT CCCCTCGTCC CAAATCTATT TCATAATCAA
AGCATTCCCA TCACTCTTGT ACTAGTAGCA TTACTAGGGA CGGTTTTTTT GAGAGGTTTT
CGAGAAGCAA TCGGTATTGC CGTCGTTTTG GTAAGCGTAT ATCTGCTGTT AAATTTAATT
GTAATTGGCG TTGGCTTGTA TCAAGTTCTC ATTTACCCAT CAGCGATCGC TAATTGGCAA
ACGGCAATTT TTGCCCGTCA CTCAAATTTT TTCGTCGTCA TCGGCCTATC TATGTTGTTA
TTCCCCAGGT TGGCACTGGG TTTATCAGGC TTTGAGACTG GCGTTACCGT TATGCCTCTG
GTACAAGGTA GTAGCAGTGA TACACCCCAA CACCCTAGTG GACGTATTCG CAATACTCGC
AAGTTACTAA CGGCGGCGGC GGTAATTATG AGTTTCTTTT TGCTTACCAG CAGCTTTGTC
ACAACTTTGT TGATTCCCGC AGCCGAATTT GCTACAGGCG GCAAAGCTAA TGGGCGCGCC
TTAGCTTATC TGGCACATCT ATATTTAGGT AACAGCTTTG GCACAATTTA TGACCTCAGC
ACAATTTCCA TTTTGTGGTT TGCAGGTGCA TCCGCAATGG CGGGACTACT CAATATTGTG
CCTCGCTACT TGCCACGTTA CGGTATGGCT CCCAATTGGG CATTAGCAGC AAGACCTTTA
GTTTTAGTCT ATACAGCGAT CGCCTTTGTC GTCACAATTA TCTTCCGCGC CAACGTGGAA
GCCCAAGGGG GAGCTTACGC CACAGGTGTG TTAGTTTTAA TCAGTTCAGC CGCCTTTGCT
GTCACCCTAT CCGCCCACCG TCAAAGATCC ACAAAAGGTC AATTTCTCTT TGGTAGCATC
ACCTTAGTAT TTATATATAC GACTATCGTC AATATTATTG AAAGGCCGGA GGGTATTAGA
ATCGCTGGTT TCTTCATCAG CGCCATCATT TTTACTTCCC TAGTTTCCCG CGTTTGGCGG
TCAACAGAAT TGCGAGTAGA GCAAATCGAA GTTGACGAAC TGGCTCATCA ATTTATTGTT
GAAGAAAGTC AAGGTGCAAT CCGCCTGATT GCCAATCGAT TGAATGATGG CGATGAACAA
GAGTATTTTT TAAAAGAGAC AGAAGTACGT GAAGACAATC ACATTCCACC CACCGATCCC
ATCCTGTTCT TAGAGATCAT TGTATCCGAT GCTTCCGATT TTGCCGATGT CATCAAAGTA
AAAGGCGTGC AAGTCGGAGC TTATCGCATC CTCCGAGCTG AGAGTGCAGC CGTACCCAAC
GCCATTGCAG CCCTACTTCT ATATATACGT GACCAAACAG ATAAAATTCC TCACGCTTAT
TTCGGTTGGG TAGAAGGAAA CCCCATCCAA TATTTGCTAC GTTTCATCCT GTTTGGTGAA
GGTGATATTG CTGTAGTCAC CCGTGAAGTT CTACGCCGTG CAGAAAAGAA TCCACACAGA
AGACCAGCCA TTCATGTTGG GGGTTAA
 
Protein sequence
MAKLITSTQR LGRQLMDWLL EEDRQEKEGP YRKEEAHRKH SWWQVMCLTG VDYFSTLGYQ 
PGIAALAAGA LSPIATLILV LLTLFGALPI YRRIASKSPH GQGSIAMLEH LLSWWQGKLL
VLCLLGFVAT DFIITITLSA ADATAHIIEN PLVPNLFHNQ SIPITLVLVA LLGTVFLRGF
REAIGIAVVL VSVYLLLNLI VIGVGLYQVL IYPSAIANWQ TAIFARHSNF FVVIGLSMLL
FPRLALGLSG FETGVTVMPL VQGSSSDTPQ HPSGRIRNTR KLLTAAAVIM SFFLLTSSFV
TTLLIPAAEF ATGGKANGRA LAYLAHLYLG NSFGTIYDLS TISILWFAGA SAMAGLLNIV
PRYLPRYGMA PNWALAARPL VLVYTAIAFV VTIIFRANVE AQGGAYATGV LVLISSAAFA
VTLSAHRQRS TKGQFLFGSI TLVFIYTTIV NIIERPEGIR IAGFFISAII FTSLVSRVWR
STELRVEQIE VDELAHQFIV EESQGAIRLI ANRLNDGDEQ EYFLKETEVR EDNHIPPTDP
ILFLEIIVSD ASDFADVIKV KGVQVGAYRI LRAESAAVPN AIAALLLYIR DQTDKIPHAY
FGWVEGNPIQ YLLRFILFGE GDIAVVTREV LRRAEKNPHR RPAIHVGG