Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0969 |
Symbol | |
ID | 3680232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1171766 |
End bp | 1173712 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637716303 |
Product | putative amino acid transporter |
Protein accession | YP_321488 |
Protein GI | 75907192 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAAC TAATTACTTC TACACAACGA CTCGGCAGAC AGTTGATGGA CTGGTTGCTG GAAGAAGATA GACAAGAGAA AGAAGGCCCT TACCGTAAGG AAGAAGCCCA CCGCAAGCAT TCCTGGTGGC AGGTCATGTG TTTGACTGGC GTAGATTATT TTTCTACCCT TGGTTATCAA CCAGGTATTG CGGCACTAGC AGCCGGCGCT CTTTCTCCGA TAGCGACGCT GATTTTAGTT CTACTAACAC TTTTTGGTGC ATTGCCCATT TATCGTCGCA TTGCTAGTAA AAGTCCACAT GGACAAGGAT CTATTGCCAT GTTGGAGCAT TTGCTTTCTT GGTGGCAAGG CAAATTACTC GTATTGTGCC TGCTCGGTTT TGTGGCGACA GACTTCATCA TTACGATTAC TCTCTCGGCT GCTGATGCTA CAGCCCATAT CATCGAAAAT CCCCTCGTCC CAAATCTATT TCATAATCAA AGCATTCCCA TCACTCTTGT ACTAGTAGCA TTACTAGGGA CGGTTTTTTT GAGAGGTTTT CGAGAAGCAA TCGGTATTGC CGTCGTTTTG GTAAGCGTAT ATCTGCTGTT AAATTTAATT GTAATTGGCG TTGGCTTGTA TCAAGTTCTC ATTTACCCAT CAGCGATCGC TAATTGGCAA ACGGCAATTT TTGCCCGTCA CTCAAATTTT TTCGTCGTCA TCGGCCTATC TATGTTGTTA TTCCCCAGGT TGGCACTGGG TTTATCAGGC TTTGAGACTG GCGTTACCGT TATGCCTCTG GTACAAGGTA GTAGCAGTGA TACACCCCAA CACCCTAGTG GACGTATTCG CAATACTCGC AAGTTACTAA CGGCGGCGGC GGTAATTATG AGTTTCTTTT TGCTTACCAG CAGCTTTGTC ACAACTTTGT TGATTCCCGC AGCCGAATTT GCTACAGGCG GCAAAGCTAA TGGGCGCGCC TTAGCTTATC TGGCACATCT ATATTTAGGT AACAGCTTTG GCACAATTTA TGACCTCAGC ACAATTTCCA TTTTGTGGTT TGCAGGTGCA TCCGCAATGG CGGGACTACT CAATATTGTG CCTCGCTACT TGCCACGTTA CGGTATGGCT CCCAATTGGG CATTAGCAGC AAGACCTTTA GTTTTAGTCT ATACAGCGAT CGCCTTTGTC GTCACAATTA TCTTCCGCGC CAACGTGGAA GCCCAAGGGG GAGCTTACGC CACAGGTGTG TTAGTTTTAA TCAGTTCAGC CGCCTTTGCT GTCACCCTAT CCGCCCACCG TCAAAGATCC ACAAAAGGTC AATTTCTCTT TGGTAGCATC ACCTTAGTAT TTATATATAC GACTATCGTC AATATTATTG AAAGGCCGGA GGGTATTAGA ATCGCTGGTT TCTTCATCAG CGCCATCATT TTTACTTCCC TAGTTTCCCG CGTTTGGCGG TCAACAGAAT TGCGAGTAGA GCAAATCGAA GTTGACGAAC TGGCTCATCA ATTTATTGTT GAAGAAAGTC AAGGTGCAAT CCGCCTGATT GCCAATCGAT TGAATGATGG CGATGAACAA GAGTATTTTT TAAAAGAGAC AGAAGTACGT GAAGACAATC ACATTCCACC CACCGATCCC ATCCTGTTCT TAGAGATCAT TGTATCCGAT GCTTCCGATT TTGCCGATGT CATCAAAGTA AAAGGCGTGC AAGTCGGAGC TTATCGCATC CTCCGAGCTG AGAGTGCAGC CGTACCCAAC GCCATTGCAG CCCTACTTCT ATATATACGT GACCAAACAG ATAAAATTCC TCACGCTTAT TTCGGTTGGG TAGAAGGAAA CCCCATCCAA TATTTGCTAC GTTTCATCCT GTTTGGTGAA GGTGATATTG CTGTAGTCAC CCGTGAAGTT CTACGCCGTG CAGAAAAGAA TCCACACAGA AGACCAGCCA TTCATGTTGG GGGTTAA
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Protein sequence | MAKLITSTQR LGRQLMDWLL EEDRQEKEGP YRKEEAHRKH SWWQVMCLTG VDYFSTLGYQ PGIAALAAGA LSPIATLILV LLTLFGALPI YRRIASKSPH GQGSIAMLEH LLSWWQGKLL VLCLLGFVAT DFIITITLSA ADATAHIIEN PLVPNLFHNQ SIPITLVLVA LLGTVFLRGF REAIGIAVVL VSVYLLLNLI VIGVGLYQVL IYPSAIANWQ TAIFARHSNF FVVIGLSMLL FPRLALGLSG FETGVTVMPL VQGSSSDTPQ HPSGRIRNTR KLLTAAAVIM SFFLLTSSFV TTLLIPAAEF ATGGKANGRA LAYLAHLYLG NSFGTIYDLS TISILWFAGA SAMAGLLNIV PRYLPRYGMA PNWALAARPL VLVYTAIAFV VTIIFRANVE AQGGAYATGV LVLISSAAFA VTLSAHRQRS TKGQFLFGSI TLVFIYTTIV NIIERPEGIR IAGFFISAII FTSLVSRVWR STELRVEQIE VDELAHQFIV EESQGAIRLI ANRLNDGDEQ EYFLKETEVR EDNHIPPTDP ILFLEIIVSD ASDFADVIKV KGVQVGAYRI LRAESAAVPN AIAALLLYIR DQTDKIPHAY FGWVEGNPIQ YLLRFILFGE GDIAVVTREV LRRAEKNPHR RPAIHVGG
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