| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0880 |
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| Symbol | |
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| ID | 3681742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1076029 |
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| End bp | 1077822 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637716214 |
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| Product | OmpA/MotB |
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| Protein accession | YP_321399 |
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| Protein GI | 75907103 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.270978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000179778 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGATAATG ATGCAATAGA TCCTAGCAGT CAAGTATCCC CTGATCATGA CTTATCCTTA
GTTAAGGAAA TTACTAAAGT TGATGATGAA CTCAGTAAAC TTCGTAGTTT GTTGTTGGGA
GTTGAGCCAG CTAAGCTTAA CCACTTTTAT GAACTATTAG ATAACCCACA AATCAGACCA
GAAGATATTA GCCGCTTACT TCCAGAAGCT GTGATCTTAA GATCGCAGCA AGATAAACAA
CTAATTACAG CCATGATTTC CATTGTTGAA GAAGCGATTC AAGTTTCTGT TCAACAAGAT
GAAAATATAC TTTCAGAAGC TTTTTTTCCA GTCATTATTC CTGCATCTCG GAAAGCGATC
GCCTCATTGC TTGATGAAAT GATGCAATCC CTTAACCAAA CTCTAGAGCA TAGTTTTTCC
CTAGAAAGTT TGCAATGGCG ACTAGAAGCG AAACGCACAG GGAAATCATT TGCAGAAATA
GTTCTACTGC GGACATTAGT CTATCGAGTA GAACAGATAT TTTTAATACA TAAAAACACA
GGATTATTGT TGCGACATCT TGTAGCCAGT CAAGTAACCA GCCAAGACCC AGATTTAGTG
GTTGCGATGT TGACTGCTAT TCAAGATTTT ATCAAAGACT CTTTTAGTGT TCAAAAAACA
GATCAATTGC AAAGTTTGCA TTTTGGAGAA CTGCGAATCT GGATTACAGA AGGGCCACAA
GCATTATTAG CAGCGACAAT CCGGGGTAAT CCTCCCCAAG AATTGAGATT AGGTCTGCAA
ACAGCAATTG AAAAAATTCA TCTCAAGCTG AGTAGAGAGA TGAAAGACTT TGCTGGGGAT
GCAGAACCAT TTCAAGTATG TCAGCCTTAT TTAGAATCTT GCCTAATCAG TCAGTATAAG
TCTGCGTCAA AAAAAAGTTA CAAATATGCT TGGACTTTTT TAGGTATCGT GGCGATCGCC
TGTGGGATTT GGAGTTTTTT TGCTGTCAGA GAGCAATTAC GTTGGCGTGC TTACTTGGAA
GAACTCAACT CTCAACCGGG TATTGTGGTA ACTGAAACCA AACAGCAGTT CGGTAAATAT
TTTATCTCTG GATTACGTGA TCCCTTGGCA TCAGATCCCC ATACCTTACT ACAACAAACA
AAACTCAATC CGCAAACAAT TGTCAGTCAT TGGCAAAGTT ATTTATCTTT AGAACCCCAG
TTGATGATAA AAAGGGTCAA TAAATTACTC CAACCCCCAC CTACTGCATC ACTAAAAATT
GACCAGAATG GTGTTCTCTA TGCTGTTGGC TCTGCACCCC GTCAATGGAT TTTAGCCACA
CGTAAATCAT GGTCTGTCAT ACCCGGATTA ACCCAATTTC AAGATCAGGA TCTTGTAGAA
AGCGAATTAA AGGAATTGGC ATTATACCAA AGTCAAATTG AGCGAGCCAT TGTCTTTTTT
CCAGAAGGTT CTCAAGAAAT TATTCCTAGT GAATTATCTA AATTAAATAA CTTAGCATTA
GCAGTTAAAA AACTTTTAGC CGTTGCTAAA TATCTAGAGA AAGATGTATA TATTCAAATA
ATAGGACATA CTAATACAAC TGGTACGGAA TCAAGGAATG CTCAACTGAG CGAAGGACGC
AGTCAAAGAG TTTTATCTTA TCTATCTTCT CAAGGTATTA GCACCAGCCA GTTACAAGTA
TTAGGAGTAA GTTCTAGCCA ACCTTTGCAG CCAGAATTGA CAGATGAAGG TAAAAAATTT
AATCGCCGAG TGTCCTTCAA GGTCATAATT ATGAGGGTTG AACGCTCGAA ATAA
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| Protein sequence | MDNDAIDPSS QVSPDHDLSL VKEITKVDDE LSKLRSLLLG VEPAKLNHFY ELLDNPQIRP
EDISRLLPEA VILRSQQDKQ LITAMISIVE EAIQVSVQQD ENILSEAFFP VIIPASRKAI
ASLLDEMMQS LNQTLEHSFS LESLQWRLEA KRTGKSFAEI VLLRTLVYRV EQIFLIHKNT
GLLLRHLVAS QVTSQDPDLV VAMLTAIQDF IKDSFSVQKT DQLQSLHFGE LRIWITEGPQ
ALLAATIRGN PPQELRLGLQ TAIEKIHLKL SREMKDFAGD AEPFQVCQPY LESCLISQYK
SASKKSYKYA WTFLGIVAIA CGIWSFFAVR EQLRWRAYLE ELNSQPGIVV TETKQQFGKY
FISGLRDPLA SDPHTLLQQT KLNPQTIVSH WQSYLSLEPQ LMIKRVNKLL QPPPTASLKI
DQNGVLYAVG SAPRQWILAT RKSWSVIPGL TQFQDQDLVE SELKELALYQ SQIERAIVFF
PEGSQEIIPS ELSKLNNLAL AVKKLLAVAK YLEKDVYIQI IGHTNTTGTE SRNAQLSEGR
SQRVLSYLSS QGISTSQLQV LGVSSSQPLQ PELTDEGKKF NRRVSFKVII MRVERSK
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