| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0875 |
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| Symbol | |
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| ID | 3681737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1070286 |
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| End bp | 1071728 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637716209 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_321394 |
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| Protein GI | 75907098 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0516063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00230539 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAATC ATAACTGGAC TAGAAGAGAT TTTATCAAAG GCGTAGGAGC CACCACCGCC
GGCATTACCC TATCTGCCTG TAACCCTTCA GGAGATAGAT CCGCCACAGG CCTAACCCAA
GAAGCCCTAA CCATCAAGCC AGTAATCAAA TCCAGCGATT TAGAAAAACC CGATTTGATT
GTGGGATACG TTCCTGTAAA TGATTGTGCG CCATTTGCGA TCGCCTGGAA AAAAGGCTTT
TTTCGCAAGT ATGGCTTAAA CGTCCAACTC AACCGCGAAG CCAGTTGGGC TACCTCCCGC
GATGGCTTAA TTTTTGGTCG TCTTGATGCT GCACCTGTAG TATCTGGTGC AGTCACCAAC
GCCCGTATAG GTGCAGAAGG CGCACGTCAC GCGCCCTTAT GTGCAGCCAT GACAATCCAT
CGTCACGGTA ACGCCATGAC CATGAACAAA GCCATGTGGG ATTTTGGCTT GCGTCCTTGG
TATGAATATC AAGAAAAATA TGGCGATGGT GCATTAGAAG CCTTTGGACG GGACTTTCGG
GGTTACTTTG AGAAACAACC ACCAGAGAAC AAAGTTTGGG CTGTAGTTTT AAGTTCGGCA
ATTTACGAAT ACTTCGTCCG TTATGTATCG GCTGCGGCTG GTGTTGATCC CCTCAAAGAA
TTTCGCGTGA TTATTGTTCC ACCACCCCAG ATGGTGACCA ATGTACGAAT AGGGGCAATG
CAAGCATACA TGGTAGCAGA ACCTTGGAAT ACCAGAGCAA TCACAGGTAA CGAAGGCATT
GGTTTTACTT TTGCCCAAGG TAAAGAAGTC TGGCTGGGAC ACCCAGATAG ATTATTGGGA
GTAATGGAGT CTTTTATTGA TCAATACCCC AAAACCTACC GTTCCTTGGT CAAAGCCATG
ATTGAAGCTT GCCAATATTG CAGTAAACCG GAAAATCGCC AAGAAGTCGC TGAACTAATT
ACAGACCGTT CCTTCACAGG TGCAAGACCG AAAAATAAAA ATTTACCAAT CACTAAATTG
ACCGCACCAG GAATTATCGG TTCATACAAC TATGGCGGAT TTGATGGCAA AGACCGCACC
ATTCCCGCCG CAGACACGAC AATTTTCTAC GACATTCCCG ACAACCTGCC CAAACAACCA
GCCGAACACT CTACATTTTT ATGGAGATCC AGAAGCCTTT GGTTAATGAC TCAAGCCGCC
CGTTGGGGAC AAATCAAAGA ATTTCCCAAA AATGCTGAAC AATTAGCCGA AAAAGGCTGG
AGAACAGATT TATATCGCCA GATAGCCGCA GAAATGGGAA TTCAATGTCC CCAGGATGAT
TACAAAGTTG AGCCACCGGA AGTATTTATA GATAAGAAAG GTTTTGACCC CAGTGACCCT
GTTGGCTATT TGAATAGTTT TGCAATTAGG GCTAATGCGC CCACTCGTTT TTTCCTGTCT
TGA
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| Protein sequence | MSNHNWTRRD FIKGVGATTA GITLSACNPS GDRSATGLTQ EALTIKPVIK SSDLEKPDLI
VGYVPVNDCA PFAIAWKKGF FRKYGLNVQL NREASWATSR DGLIFGRLDA APVVSGAVTN
ARIGAEGARH APLCAAMTIH RHGNAMTMNK AMWDFGLRPW YEYQEKYGDG ALEAFGRDFR
GYFEKQPPEN KVWAVVLSSA IYEYFVRYVS AAAGVDPLKE FRVIIVPPPQ MVTNVRIGAM
QAYMVAEPWN TRAITGNEGI GFTFAQGKEV WLGHPDRLLG VMESFIDQYP KTYRSLVKAM
IEACQYCSKP ENRQEVAELI TDRSFTGARP KNKNLPITKL TAPGIIGSYN YGGFDGKDRT
IPAADTTIFY DIPDNLPKQP AEHSTFLWRS RSLWLMTQAA RWGQIKEFPK NAEQLAEKGW
RTDLYRQIAA EMGIQCPQDD YKVEPPEVFI DKKGFDPSDP VGYLNSFAIR ANAPTRFFLS
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