Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0184 |
Symbol | |
ID | 3683143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 239911 |
End bp | 241323 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637715512 |
Product | major facilitator transporter |
Protein accession | YP_320705 |
Protein GI | 75906409 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.012641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCTG TCCCAATTGA AACGGCTACT TCTCTAAATT CGGAAATTCT CCAGATTACT CCACCAGAGA CAACACTCAC TCTAGCTAAT CAATCTAATA TTCGCATTCC TAAAGAGGCA ATTCGCACTA GTTTAAAAGC ATCAACTGTC GATTCTGTAT TTGCAGCAGT TTATTCTTTG GGTACTGGTG GGATTTTGCT GAGTAATTTC TTAGTGGAGT TGGACGCTAG TCCCATCGTA TTCGGGATGT TGTCTTCAAT CCCTATGCTG GTCAATTTAA TTCAGCCTTT GGGAGCTTAC TTATCTGAAC TTACCACTAG CCGTTTTCGA TATTCCATGT GTATTTTTGG CACGGCGCGG TTCTTATGGC TGATTTTATT TATCGGGGTA ATTCTATTCA CACGGGGAAA TGTCGATTCT CAACAATTAG AAGTATTGAC ATTATCAATA CTATTAATCA CAAATTTATT GGGGGGATTA GGGAGTGCTT CTTGGTTAAG TTGGCTAGCA ATGATTGTTC CTCGGCGCTT ACGAGGTAGG TATTTTGGGT TACGTAATAG CGCAGCTAGC CTGACTAATT TGATTTGTGT ACCCTTGGCT GGGTTGCTTG TCTCTCACTG GTATGGCGGA ACTATCCAAG GCTATGGCGT AGTACTTTTG ATCAGTATCT TGTTTGGGTT TTTGAGCTTG GGGTGTCAAT ATTTCAAAAT AGATGTGAAT CCGCAATTAC AACATGAGGT TGTCCAATAT CCTCAAAAGA ATGAAGTTAG TAATACATCT GCATCCACCT TACAACTAAC AATTATTCCA CCACAACCTG AGTCTATTAC CATTTGGAAA AACTCAAATT TCCTGATGTT TCTGGTTTAT TTTGGTCTAT GGATGTTAGC TGTAAATATT AGCGCCCCGT TTTTCAATCT CTATATGCTA GACACATTAA ATCTAGATGT AAGTTGGGTG ACAATTTACG GCAGTCTCCT AGCGGGAGCT AATTTGCTCA TGCTAATTTT GTGGGGCAAG TTAGCAGATA AAATCGGGAA TCGACGTATT TTAATTTATA TAGGAATTTT AGTAGCGCTG ACACCATTAC TATGGCTGGG AATTGGTATT AACACTTTAG ATATTTGGCT ATGGTTGCCT TTATTACATA TTTTACTAGG CGGAACTGCG GCGGCTATTG ATTTATGTAA TAACAATATG CAGTTAGGAA TTGCACCATT AAGGAATCAG TCCATTTATT TTGCGATCGC CTCTGCTGTC GCTGGTGTCA GTGGTGCCGT AGGCACAACT ATAGGTAGTT TTATCACCCA ATTCACCCAA TATGGAGGCT TATTGGCAGT TTTTGTTCTA TCTACTGCAT TGCGCCTGTT AGCGTTAATT CCCTTGTTTT TTATCCAAGA ACCGGGGAAG TGA
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Protein sequence | MDSVPIETAT SLNSEILQIT PPETTLTLAN QSNIRIPKEA IRTSLKASTV DSVFAAVYSL GTGGILLSNF LVELDASPIV FGMLSSIPML VNLIQPLGAY LSELTTSRFR YSMCIFGTAR FLWLILFIGV ILFTRGNVDS QQLEVLTLSI LLITNLLGGL GSASWLSWLA MIVPRRLRGR YFGLRNSAAS LTNLICVPLA GLLVSHWYGG TIQGYGVVLL ISILFGFLSL GCQYFKIDVN PQLQHEVVQY PQKNEVSNTS ASTLQLTIIP PQPESITIWK NSNFLMFLVY FGLWMLAVNI SAPFFNLYML DTLNLDVSWV TIYGSLLAGA NLLMLILWGK LADKIGNRRI LIYIGILVAL TPLLWLGIGI NTLDIWLWLP LLHILLGGTA AAIDLCNNNM QLGIAPLRNQ SIYFAIASAV AGVSGAVGTT IGSFITQFTQ YGGLLAVFVL STALRLLALI PLFFIQEPGK
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