| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0157 |
|---|
| Symbol | |
|---|
| ID | 3683237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 208316 |
|---|
| End bp | 210571 |
|---|
| Gene Length | 2256 bp |
|---|
| Protein Length | 751 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637715484 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_320678 |
|---|
| Protein GI | 75906382 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCGAT TTGAGAAGCG ACCAGACAAC GACCCGCGAG TCCGAGGCGA GTTATCCAGG
GCAGCAGAAA CAGCTCTATG GGCTGTTGTG GAAGATTTAG AAAGTCTACA GCAGAATGTC
CTCAGATCAT TTCAGGAAGA AATCAAAAAA CTACAGACAG AAAAAGACCG TCTAACAGAT
GAAGTTCAGC AGCTAATTGA AGAAAAAGAA CATTTACAAG AGGTACGGCG GATTACAGAG
CAGCAAGTAT TAATCCGTCA ATTGTCAGAA GCTTTAGCCA AGCACATCTG TTCTCAACTG
CAATCATCAC TAGCGAAAAT AGCCAACCAA ACAGAGAGCC AAATAGCTGC TCTCAAGTCA
GCCCAAAGCA TCGGCCCTGC TATTGAGAAC AACGAGCAGG TAGAAAAAAT GCTGGGTAGT
CTAGACGATA ACTTAACGAT CGCCTTTAAT TCTCTCCAAC AAGAACTCAA AAACTACCAA
AGTAATCTCT CCCAGCAGTT GTCTCGAATG TATAACCAGC AGCAGCAAGG AGAAACAATT
GTAGAAGAGT TGATTGATCG TCTACGTGGG GAACTGACAA GAGCTATCCA AGAAACATCA
CCAGCAAAAG CCCAGTTATC CCCGCCAACG GTGTTGCAGC CTTCAGAACT ACAACCCCCT
AGCTCTCCGG CAGTAGTGAA TTTATCACCA CCTACGGTAT TGCAATTTCC CGAACAACAA
TCGCCAAATC CTTCACAAAC ATCTACACCA GTAGAGGAAA CTAGCACTAC CAAGCCATCG
GTTAGTATTA CTCCTCCTGA GAAATCAACA CCAGTACCCA TAGTTCCACC ACCCCAGGAA
ACACGCCCTG AACCACAGTC TGTGATCCCC AAAGTGTCAC CAGACAGCGA GACGAAATTA
CAATCAACTC AGGAAAAAGC TGCTGAACCC AGTTCTGTAA TTAATAGAGA ATTATCTGCG
AGTGCGGCTA AATCTCCACC AACTCCAGAA AAACCCCCTG AGCCAATTTC TACAAGTAAA
ACGAAGTTCT CACCCTCCTC AGAAAAACCC CCTGAGCCAG TTTCTACAAG TAAAACGAAG
TTCTCACCCT CCTCAGAAAA ACCTCCTGAG CCAGTTTCTG TACTCAGTCC AGATTCATCG
GCAAGTAAAG CCTCATCTCC TCCACCTGCA TCGGTAGTCA GACGGGGATC AACACCTTCC
TCATCAAGAT CACGTAAATC ATCAAATTTG TCCCCAGTCC AGGTGGGTTT CTTGTTGGTT
GTGTTGTCCA CCGTGATGAC AGCGTTATAC AACGTAGTCC TGAAAGGGAT GTTTTATAAA
ACTTCTCAAC TCTCCGCCAT GCTGGAAGTC GCGGGGTTAA TCTCGCCGAC GTTGGGAAAT
ATTATGTTAA TTCTGACTTT GCGATTGATG GTGGTTGTAC CACTAATGAT ACTTTTAGCA
CCTATGATGT ATCCGCAAGT GTGGCAGGAT CTGCAAAACC TTAAGCAATC ATTAGGCAAT
AATCAGTCTG GAAGTCGTTC TCAGCCAAAG AGAGTTGTCC AGTTAATGTT TGCTAGTGGC
TGCTTTTTGT TTTTATCGCA AGTTCTGATT TATCTGGCCA TTGGTCAAGT TCCCACCGGA
GTGGCGATCG CCCTTTTCTT TGTCTATCCA CTGATTAACG GGGTGTTATC CTGGCTCCTG
TTCCGCGATC GCCCCGGTGT ATTCCGTGCT AGTGCGATCG GCTCTATTTT CTGTGGTGAG
GTGTTAGTTT TTGCGGGAGC AACCAGCACT GGTATAGGAA CTACTCCCCT TGGTAGCATC
ACTGCAATTC TCGCTGGTGC AGCCTTTGCT TGTTACCTGA TACTGACGCG CGTATGTGCT
GCTAAAGTCC ATCCAGTATC TTTGTCTTTG ATTAACTTCG TCACCATGTT GGGTTTGAGT
TTTATCTTCT TGATGATACC CTTACCAGAA AACTGGAGCT TAGTTGTTGA CCCTTCTAAG
TTACTGGAAA TTGTGTTAAG TGCTTTTATT TTGGGTGCTT TAACTCTATT GAGCTATGTA
TTCAGCCATA TTGGGATCAA TAAATTGGGT GGGTTGCGGT CAGCTATTAT TAGTGCAAGC
GTACCTATTT TGACAGTAAT TTTTGCTGGT TTGGTACTTC AAGAAACTTT AAACATTGCC
CAGATATTCG GAGTTTTATT TGTAACTTTT GGGGCAATTG CTTTTGGTAT TGGCAAAATA
CAAAATCCCA ACAAACCCTC CAATGCAGAA GGTTAA
|
|---|
| Protein sequence | MGRFEKRPDN DPRVRGELSR AAETALWAVV EDLESLQQNV LRSFQEEIKK LQTEKDRLTD
EVQQLIEEKE HLQEVRRITE QQVLIRQLSE ALAKHICSQL QSSLAKIANQ TESQIAALKS
AQSIGPAIEN NEQVEKMLGS LDDNLTIAFN SLQQELKNYQ SNLSQQLSRM YNQQQQGETI
VEELIDRLRG ELTRAIQETS PAKAQLSPPT VLQPSELQPP SSPAVVNLSP PTVLQFPEQQ
SPNPSQTSTP VEETSTTKPS VSITPPEKST PVPIVPPPQE TRPEPQSVIP KVSPDSETKL
QSTQEKAAEP SSVINRELSA SAAKSPPTPE KPPEPISTSK TKFSPSSEKP PEPVSTSKTK
FSPSSEKPPE PVSVLSPDSS ASKASSPPPA SVVRRGSTPS SSRSRKSSNL SPVQVGFLLV
VLSTVMTALY NVVLKGMFYK TSQLSAMLEV AGLISPTLGN IMLILTLRLM VVVPLMILLA
PMMYPQVWQD LQNLKQSLGN NQSGSRSQPK RVVQLMFASG CFLFLSQVLI YLAIGQVPTG
VAIALFFVYP LINGVLSWLL FRDRPGVFRA SAIGSIFCGE VLVFAGATST GIGTTPLGSI
TAILAGAAFA CYLILTRVCA AKVHPVSLSL INFVTMLGLS FIFLMIPLPE NWSLVVDPSK
LLEIVLSAFI LGALTLLSYV FSHIGINKLG GLRSAIISAS VPILTVIFAG LVLQETLNIA
QIFGVLFVTF GAIAFGIGKI QNPNKPSNAE G
|
|---|
| |