| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_2330 |
|---|
| Symbol | |
|---|
| ID | 7407749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | + |
|---|
| Start bp | 2471380 |
|---|
| End bp | 2472981 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643716694 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002574173 |
|---|
| Protein GI | 222530291 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGT TCAAATCTTC TAAAAAGGTT TTAAGTATTA TCGTAGTTAT TGCATTTGCC
TTATCGCTTG TAATTCCAGC ATTTATTTCA TCAACCTCAA TAGCTTATGC AAAAACAATA
CCAACACTTA CCTATTTTGT TCGTCTTGAC CCCAAGGTTG CAACATCTTA CAACAGCTAC
TCTTCAATTG CTGCTTACCA GCTTTTGCAG AAAAAACTTG GGGTAAAGAT TGTGTTCAAG
CACCCACCGG TTGGCGGAGA GACAGACCAG TTCAACTTAA TGGTTGCATC AAGACAGCTG
ACAGACATCA TTGAGTGGAA CTGGGTTGAT AACTATCCTG GTGGACCTGT AAAAGCAATG
CTTGATAAGG TAATCATAAG GCTCAATGAC TATATGCCAA AATATGCTCC AAATTTATCA
AAATACTTAC AGCAACATCC TGACATCAAA AAACTTATTG TTACAGACGA TGGTGACATT
TACGGATTCC CAGCTCTTCG TGGAACAAAC CCAAAAATTG CATGCGTATA CTATGGACCT
CAAATACGAA ATGATTGGTT GAAAAAGCTC GGATTAAAAG AACCAGAAAC AGTTGATGAC
TGGTACAAGG TTTTGAAAGC ATTTGTAACA AAAGACCCAA ACGGCAATGG CAAAAAGGAT
GAAAGAGGAT TTACAATTCT GCGAAATGCT TCAAACCCGA GATATGCATT TGATTATTCT
TCCTTCTTAG TTGGTGCATG GGGAATAAAA ACAGATTTCT TCCAGATAAA TGGAAAGGTC
AAATATGGTC CGTTAGAACC ACAATACAAA CAGTTTATAG CAACACTTCA GAAGTGGTGG
AAAGAGGGCC TCATAGACCC GGATATCCTA ACAATGAACC AGAAGGTTAT AAGAGCAAAT
GTTCAAAACG ATGTAATTGG TGCGTGGATA GGACTTCTTT CTGGCGATAT GGGCTTCTTC
TTGAACCTGA AGAAAGATAT AATAGCTACC AAGTTCCCTG TGCTCAAGAA AGGTGAACAG
CCACTTTTAG GACAGGCTGA GTTCTTGTTC GCTCGAACAA GCGCGGCTAT AACTACTGCA
TGTAAAGACA TACCAACTGC TATGAAGGTG CTTGACTGGG GTTACAGCAA AGAAGGATAT
GAAGCGTTCA ACTATGGTGT ACTTGGAAAG TCTTATATTA AGAAAGATGG CAAGGTTTAC
TATACAGATG AAATCTTGAA AAACCCACAG GGACTTTCTG CAGCAGAAGC TTTAGCAAAA
TATGCTCGTG CATCAATCAG CGGTCCTTTT GCTCAAGCTG ATGAGTATTA TCTACAGATT
CAAATGATGT ATCCACAACA AAAAGAAGCT GTCATGCAAA AATGGTCTGA TGTCAAAAAT
GACAGAATTT TGCCACCACT TTCGTTTACA GACGAAGAAT CCAAGAGACT TGCAAATATT
ATGAATACAG TCAACACGTA CTATGATGAA ATGTTCTTAA GACTTATGAC TGGAAAAGCA
ACAAATGTTG ATGCATTTGT AAAAACTCTT AAACAAATGA AGATTGATGA GGCTATTAAG
ATTTATCAAG CTGCATATGA CAGATGGAAA AAGAGAAAAT AA
|
|---|
| Protein sequence | MDWFKSSKKV LSIIVVIAFA LSLVIPAFIS STSIAYAKTI PTLTYFVRLD PKVATSYNSY
SSIAAYQLLQ KKLGVKIVFK HPPVGGETDQ FNLMVASRQL TDIIEWNWVD NYPGGPVKAM
LDKVIIRLND YMPKYAPNLS KYLQQHPDIK KLIVTDDGDI YGFPALRGTN PKIACVYYGP
QIRNDWLKKL GLKEPETVDD WYKVLKAFVT KDPNGNGKKD ERGFTILRNA SNPRYAFDYS
SFLVGAWGIK TDFFQINGKV KYGPLEPQYK QFIATLQKWW KEGLIDPDIL TMNQKVIRAN
VQNDVIGAWI GLLSGDMGFF LNLKKDIIAT KFPVLKKGEQ PLLGQAEFLF ARTSAAITTA
CKDIPTAMKV LDWGYSKEGY EAFNYGVLGK SYIKKDGKVY YTDEILKNPQ GLSAAEALAK
YARASISGPF AQADEYYLQI QMMYPQQKEA VMQKWSDVKN DRILPPLSFT DEESKRLANI
MNTVNTYYDE MFLRLMTGKA TNVDAFVKTL KQMKIDEAIK IYQAAYDRWK KRK
|
|---|
| |