| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_0525 |
|---|
| Symbol | |
|---|
| ID | 7408649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | + |
|---|
| Start bp | 593022 |
|---|
| End bp | 594029 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643714907 |
|---|
| Product | Isocitrate dehydrogenase (NAD(+)) |
|---|
| Protein accession | YP_002572424 |
|---|
| Protein GI | 222528542 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00175] isocitrate dehydrogenase, NAD-dependent, mitochondrial type
[TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type
[TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000187732 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATACA GAATTACACT TATTCCTGGC GATGGTATAG GACCAGAGGT TACAGAGGCA
GCAAGAAGAG TTTTGGATGC ATCGGGTGTA AAGATAGAGT GGGAAGTTGT GGAAGCTGGC
GAAAAGGTTA TGCAGGAGTA TGGGACGCCA CTTCCTGACT ATGTTTTGGA AAGTATAAAG
AGAAATAAGG TTGCACTAAA AGGTCCTATT ACAACACCTG TTGGGACAGG GTTTAGAAGT
GTTAATGTTG CACTCAGACA AGCGTTAAAC CTTTATGCAA ATGTAAGACC TGTAAAGTCT
TATGAAGGTG TTCCTTCAAG ATATACAAAT GTGGATTTGA TCATTGTAAG AGAAAATACA
GAGGACCTTT ATGCAGGTAT TGAATATATG GCTGGCGATG ATGCGGCGGT TGGTGTTAAA
ATAATAACAA GAAAGGCAAG TGAGAGGATT GTCAGGTACG CATTTGAGCT TGCAAGAAGA
GAAAAAAGAA GAAAGGTCAC AGCTGTTCAT AAAGCAAATA TTCAAAAACT TACTGATGGG
TTGTTTTTAG AATGTGCAAG AAAGGTAGCG CAGGACTATC CAGATATAGA GTTTGAAGAT
ATGATTGTTG ATGCAATGAG CATGAAGCTT GTCCAAAGCC CAGAAAACTA CGACGTTTTG
GTTATGCCAA ACATGTACGG AGATATCCTA TCTGACTTGG CGGCAGGGCT TGTGGGAGGT
TTGGGAATAG CACCAGGTGC TAACATCGGC GAAGATGGGG CGGTATTTGA GCCAATCCAC
GGCTCTGCAC CAAAAAGAGC AGGACAGAAC TTGGCAAATC CAACTGCAAC TATACTTTCT
GGTGTTATGA TGCTAAGGTA CTTGGGCGAG CTTGAAACAG CTGATAGAGT TGAAAAGGCG
GTGGCTAAAG TTATAAAAGA AGGCAAAGAG GTTACATACG ACCTTGGAGG CTCAACAGGT
ACAAAAGAGT TTGCAGATGC AGTCATCCGC GAGATGGAAA GGATATAA
|
|---|
| Protein sequence | MAYRITLIPG DGIGPEVTEA ARRVLDASGV KIEWEVVEAG EKVMQEYGTP LPDYVLESIK
RNKVALKGPI TTPVGTGFRS VNVALRQALN LYANVRPVKS YEGVPSRYTN VDLIIVRENT
EDLYAGIEYM AGDDAAVGVK IITRKASERI VRYAFELARR EKRRKVTAVH KANIQKLTDG
LFLECARKVA QDYPDIEFED MIVDAMSMKL VQSPENYDVL VMPNMYGDIL SDLAAGLVGG
LGIAPGANIG EDGAVFEPIH GSAPKRAGQN LANPTATILS GVMMLRYLGE LETADRVEKA
VAKVIKEGKE VTYDLGGSTG TKEFADAVIR EMERI
|
|---|
| |