Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Arth_4219 |
Symbol | |
ID | 4443585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Arthrobacter sp. FB24 |
Kingdom | Bacteria |
Replicon accession | NC_008539 |
Strand | + |
Start bp | 52400 |
End bp | 54172 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639687744 |
Product | conjugative transfer gene complex protein |
Protein accession | YP_829441 |
Protein GI | 116662388 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTGCAC CGAACCGTAA GGGAATGGGC CTGGGGGATG CCCTGCTGGT CTGGTTCGCC ATCGGATTCA TCGTCATCGT CGGCGGCGGG ACTTACGCGG CCGTCCACCT GGGATCTTGG ATGGCCGGCA TAGACGCACC CCCCAAACAT CCCATCGACC TGATCGCCGG GCTGGTCAAG GGCCGCGTGC CGTGGCCCGT CCAGTCCACC GTCGCGGCCG CCCTCATGGC CGGCGTGGTC CTGGCCCTGA CCATCGTCGT TCTCGTGGCC TGGAGGAAGG GTGCCTCCAA GCGTGCCCGC GTCGACAAGG CCGCACGGTA CCTGGGTCGA GGGAAGTCCT TGGCTGCGTT CTCCGAGAAG GGCGCGAAAG CGACGGCGGA TCGGCTGGGA GTGACAGGCA CGCCGGGCAT CGTGGTGGGC AAGGTTGTCT CCACCGGCCA GACGTTCATT CAGTCCTGGG AAGACCTCAG CCTCGATATC TGGGGGCCGC GTACCGGTAA GTCGACCTCA CGGGTTATGC CCGCGATCCT GGACGCACCG GGTGCTGTGG TGTCGACCTC GAACAAGCGT GACGTGGTGG ACGGCACCCG TGGCGTCCGC GAGCTCACGG CCCCGGTATG GGTGTTCGAT CCGCAGAAGA TCGCGCAGGA GGAAGCACAG TGGTGGTGGA ACCCGCTCTC TTACGTCACC GACGAAGAGA AGGCCTACAA GCTCACGCAG CACTTCTCGG TTGGGTCGCG GGTCCCGGGT TCCAAGCCGG ATGCCTACTT CGACCCCAAA GCCGAAGACA TCCTCTCCTC GTACTTCCTC GCGGCCGCCC TCGGGGGGCT GCCCATTACG CAGGTGTACC TGTGGGTGAC GGAGCAGGTA AACCGGGAAC CAATCAACAT CCTGAAAGAG CATGACTACG AGCTGCAGTA CAAGGGCCTG GAGTCCACGC TGGAGCTGGC CGACAAACAG CGCGACGGCA TCTTCGGCAC GGCCGAGAAG ATGATCCAGT GCCTCAAGAG CAGGAACACG CTGCGCTGGG TCGCTCCCAT GGGCGGTGCG ACAGTGGCCA CGGATACCCG CCGGCAGTTC AACCCGCACG CTTTCGCCGC CTCCCAGGAG ACGATCTACA TCCTCTCCAA GGAAGGGGCC GGCTCCGCCT CCCCGCTCAC CACAGCGTTG ACGGTGGCGA TCGCCGAGGC GATGGAGGAA CGGGCCGAAC GCAGCGGCGG CCGCCTGCCC AGACCGGCAC TGTTCGCCCT CGATGAGCTG GCCAACGTCG TCCGCTGGGC AGCCCTGCCG GACCAGTTCA GCCACTACGG CTCCAAGGGC CTGATCGTCA TGGGCATCCT GCAGTCCTGG TCACAAGGCG TTGAACTGTG GGGCGAGGCG AACATGCGGA AAATCTGGTC AGCCGCGAAC GTCAAGGTCT ACGGCGGCGG CGTCGCCGAA GAAGGCTTCC TACGCGCCCT CTCGGACCTG ATCGGGGACT ACAGCTACAC CAACGTCTCC GTCTCCTCCG GCAAGTCCGG CTCCAGCCGC TCCCGCCAGG AGGGCAAGGA ACGCATCTTC GATGTCTCCA ACCTCGCGGA GCTGGACCGT GGCCGCGCCG TGGTCCTCGC CTCCGGCGCA CCCGCCACGC TGGTCCGGAC CATGCCCTGG TACACCGGCC GGCACAAGGA AGCCGTGGAG GCGTCCATCA GGAAGTACAG CCCCCGCCCG GAGGAACCGG AGGCCGTCCC GGTGCCCGCC GCTCCGGTCG CTAATCCCTG GGTCACCGGG TAA
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Protein sequence | MSAPNRKGMG LGDALLVWFA IGFIVIVGGG TYAAVHLGSW MAGIDAPPKH PIDLIAGLVK GRVPWPVQST VAAALMAGVV LALTIVVLVA WRKGASKRAR VDKAARYLGR GKSLAAFSEK GAKATADRLG VTGTPGIVVG KVVSTGQTFI QSWEDLSLDI WGPRTGKSTS RVMPAILDAP GAVVSTSNKR DVVDGTRGVR ELTAPVWVFD PQKIAQEEAQ WWWNPLSYVT DEEKAYKLTQ HFSVGSRVPG SKPDAYFDPK AEDILSSYFL AAALGGLPIT QVYLWVTEQV NREPINILKE HDYELQYKGL ESTLELADKQ RDGIFGTAEK MIQCLKSRNT LRWVAPMGGA TVATDTRRQF NPHAFAASQE TIYILSKEGA GSASPLTTAL TVAIAEAMEE RAERSGGRLP RPALFALDEL ANVVRWAALP DQFSHYGSKG LIVMGILQSW SQGVELWGEA NMRKIWSAAN VKVYGGGVAE EGFLRALSDL IGDYSYTNVS VSSGKSGSSR SRQEGKERIF DVSNLAELDR GRAVVLASGA PATLVRTMPW YTGRHKEAVE ASIRKYSPRP EEPEAVPVPA APVANPWVTG
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