Gene Arth_3936 details

Gene Information

• Locus tag: Arth_3936
• ID: 4444811
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Arthrobacter sp. FB24
• Kingdom: Bacteria
• Replicon accession: NC_008541
• Strand: +
• Start bp: 4446251
• End bp: 4448203
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 639691767
• Product: major facilitator transporter
• Protein accession: YP_833411
• Protein GI: 116672478
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2814] Arabinose efflux permease

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCCAT CCCGCAATAG ATCCATGTCC CCCGGTGCCA TCACGGCAGT CCTTGCGCTG 
AGCGGCACGG TGGTGGCGCT GATGCAGACC CTCGTGGTGC CGCTCCTTCC GGATTTCCCC 
GGAATCCTCG GCGTTACGGC CGACGACGCG TCCTGGCTGG TCACCGCCAC GCTGCTCTCC 
AGCGCCGTGG CCACCCCGAT CGTGTCCCGC AGCGCGGACA TGTACGGCAA ACGTAAAATG 
ATGGTGATCT GCCTCGCCAT CATGGTTGCC GGCTCCATCG TGGCCGCGGT GGGGGGAAGC 
TTCCTCTGGC TTATCGTCGG CCGGGCACTG CAGGGGTTCT CCTCGGCCTT GATTCCCGTA 
GGCATCAGCA TCATGCGCGA CGAACTGCCC AAGGAAAAGA TGGGATCCGC CGTAGCCCTG 
ATGAGCGCCA CGCTGGGCAT CGGCAGCGCA CTGGGCCTCC CGCTGGCCGG GCTGCTTTAC 
GAAAGCCTGG GCTGGGAGTC CATCTTCTGG GTTTCCGGTG GCGCCGGCAC GCTGCTGCTC 
GCTGCCGTCG TCCTGGTGGT TCCCGAATCC AAGGTGCGCA CACCGGGCCG CTTCGACTAC 
CTCGGCGCAG TGATTCTTTC CGCGGCACTG GCAGCGCTGC TCCTGGGCAT TTCCAAGGGC 
GGATCGTGGG GCTGGAGTTC CGAACCGGTG CTGCTTTTGT TCCTCGCCGC CGCCATCCTC 
CTGGCCGCCT GGCTGCCCTA CGAGCTGAAG GTCAGCCAGC CGATGGTGGA CCTCCGCACC 
TCCGGCCGGC GCCCTGTCCT CCTGACCAAC CTGGCATCCC TGCTGGTGGG TTTCGCCATG 
TTCGCCAACA TGCTGCTGAC CACCCAGCAG CTCCAACTGC CCACCTCCAC CGGCTACGGT 
TTCCAGCTCA GCGTGATCAC CGCCGGCCTC TGCATGGTTC CATCCGGCCT GGCCATGGTG 
GTCTTCGCTC CCGTTTCCGG CGGCATCATC CGGCGGTTCG GCGGGAAGAC TGCGCTGATC 
TCGGGCGCGG CGGTCATGGT GGTGGGGTAC GTTGGCCGCG TCTTCTTCTG GGATTCCATC 
GCCTCGGTGA TCATCGGCTC CACGGTGGTC AGCATCGGCA CCGCCATCGC CTACGCCGCG 
ATGCCCACCC TGATCATGGG GGCCGTGCCC ATCACCGAAA CAGCCTCGGC CAACGGCCTC 
AACAGCCTGG TGCGGTCTAT TGGAACCTCG ACGTCGAGTG CAGCCGTCGC CGCCGTCCTC 
ACCTCAGTGA CCATCACCGT GGGATCCGCC CGGCTGCCGT CCTTCGAGGC ATTCAAGGAC 
GTCTTCTGGA TGGCCGCCCT GGCGTCCGCG GCCTCCATGG TGGCTGCCGT GTTCATCCCG 
CGGGCCGCGG CCGCAGCCAA GGCGGCCCTC CCTGCGCCGG CCGCCACCGA ACTGGTGGTG 
CAGGGGCGCG TCCTGACGGC CGACCGCCGC CCGGTCACTC CCGCCGTCGT CACCGTCCTG 
CAGACAAGCG GCGAACCGGT GGACTGGAGC CGGGTGGACA GCGATGGCAA CTATTCCGTG 
GCACTGCCCG GGGCGGGAAC ATATCTGATG GTGGCCAACG CCGCCGGCTG GGCGCCGATG 
GCAGAGGTGT TCGACTTCGA CGGCCGCACG CTCCAGCAGA ACTTCCACCT GGAAAACCGC 
CTGGAACTGG CCGGAACCGC CACGGTGGGA GGCACGGCCC TCACGGACGC GGTGGTCACC 
CTGTTGCAGG CCTCCGGCGA ACACGTGGCG ACAGTCCGCA CCGATTCGGA GGGACGCTAT 
TCACTGCCGC TGCCCTTGGC CGGGCGCTAC ATCGTGACCC TGCTGAACCC GGCGACCCAC 
CAGGCCATCG CCCGGAAGCT GGCCGTGGAC AACCGGTCGG TGACCGCGGA CCTGGCGATG 
GACGCCCCGG CCGGACAGCT GGTGGACGCG TGA 

 

Protein sequence

MPPSRNRSMS PGAITAVLAL SGTVVALMQT LVVPLLPDFP GILGVTADDA SWLVTATLLS 
SAVATPIVSR SADMYGKRKM MVICLAIMVA GSIVAAVGGS FLWLIVGRAL QGFSSALIPV 
GISIMRDELP KEKMGSAVAL MSATLGIGSA LGLPLAGLLY ESLGWESIFW VSGGAGTLLL 
AAVVLVVPES KVRTPGRFDY LGAVILSAAL AALLLGISKG GSWGWSSEPV LLLFLAAAIL 
LAAWLPYELK VSQPMVDLRT SGRRPVLLTN LASLLVGFAM FANMLLTTQQ LQLPTSTGYG 
FQLSVITAGL CMVPSGLAMV VFAPVSGGII RRFGGKTALI SGAAVMVVGY VGRVFFWDSI 
ASVIIGSTVV SIGTAIAYAA MPTLIMGAVP ITETASANGL NSLVRSIGTS TSSAAVAAVL 
TSVTITVGSA RLPSFEAFKD VFWMAALASA ASMVAAVFIP RAAAAAKAAL PAPAATELVV 
QGRVLTADRR PVTPAVVTVL QTSGEPVDWS RVDSDGNYSV ALPGAGTYLM VANAAGWAPM 
AEVFDFDGRT LQQNFHLENR LELAGTATVG GTALTDAVVT LLQASGEHVA TVRTDSEGRY 
SLPLPLAGRY IVTLLNPATH QAIARKLAVD NRSVTADLAM DAPAGQLVDA